Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE MTHFR rs1801133: C>T was more prevalent in BWS with KCNQ1OT1 TSS-DMR LOM (p < 0.017); however, the relationship was not significant when the Bonferroni correction for multiple testing was applied (significance, p = 0.0036). 30165906 2018
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 PosttranslationalModification disease BEFREE It can be considered one of the major and most frequent clinical manifestation of Beckwith-Wiedemann Syndrome (BWS) in case of loss of methylation at KCNQ1OT1: Transcription Star Site-Differentially Methylated Region (TSS-DMR) or in presence of CDKN1C mutations. 29047350 2017
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE More importantly, this mouse model recapitulates the molecular phenotypic characteristics of the most common form of BWS, including loss of methylation at KvDMR1 and biallelic repression of <i>Cdkn1c</i>, suggesting that deficiency of maternal transcription through KvDMR1 may be an underlying cause of some BWS cases. 28428215 2017
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE BWS is associated with various genetic alterations: a variety of molecular lesions are described on the chromosome 11p15, affecting gene expression for IGF2, H19, CDKN1C and KCNQ1OT1. 27345568 2016
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE Forty-seven patients in Taiwan with clinical suspicion of BWS were referred for diagnostic testing based on methylation profiling of H19-associated imprinting center (IC) 1 and KCNQ1OT1-associated IC2 using high-resolution melting analysis, multiplex ligation-dependent probe amplification, or high-resolution quantitative methylation profiling. 27436784 2016
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE Eighty-eight percent of BWS patients born via assisted reproductive techniques had hypomethylation of KCNQ1OT1:TSS-DMR in comparison with 49% for patients with BWS conceived naturally. 27480579 2016
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE Genetic analysis showed BWS (hypomethylation of the KCNQ1OT1 gene). 26367199 2015
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 AlteredExpression disease BEFREE Indeed, de-methylation of KvDMR accompanied by uncontrolled overexpression of KCNQ1OT1 occurs frequently in Beckwith-Wiedemann syndrome (BWS), and around 10% of BWS patients developed embryonal tumors (Wilms' tumor or hepatoblastoma). 25998555 2015
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE In patients with BWS due to hypomethylation of KvDMR1, the clinical presentation of HH is quite heterogeneous with no correlation with the degree of KvDMR1 hypomethylation. 24468603 2015
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE Prenatal diagnosis of hypomethylation at KvDMR1 and Beckwith-Wiedemann syndrome in a pregnancy conceived by intracytoplasmic sperm injection and in vitro fertilization and embryo transfer. 24767654 2014
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE We investigated whether common variation in copy number in the BWS/SRS 11p15 region or altered methylation levels at IGF2/H19 ICR or KCNQ10T1 ICR was associated with SGA. 24934635 2014
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 PosttranslationalModification disease BEFREE Both patients had an initial clinical diagnosis of Beckwith-Wiedemann syndrome (BWS) but normal methylation analysis for LIT1 and H19 status. 24756053 2014
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 PosttranslationalModification disease BEFREE BWS has five known causative epigenetic and genetic alterations: loss of methylation (LOM) at KvDMR1, gain of methylation (GOM) at H19DMR, paternal uniparental disomy, CDKN1C mutations and chromosomal rearrangements. 23719190 2013
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE Thirteen BWS patients (72%) harbored loss-of-methylation (LOM) at LIT1-DMR and two patients (11%) harbored gain-of-methylation (GOM) at H19-DMR, whereas two patients (11%) had both LOM at LIT1-DMR and GOM at H19-DMR, reflecting paternal UPD 11. 23803580 2013
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 AlteredExpression disease BEFREE KCNQ1OT1 (the most-often misregulated imprinted gene in BWS) was biallelically-expressed in various organs in two out of seven overgrown conceptuses from the ART group, but shows monoallelic expression in all tissues of the AI conceptuses. 23751783 2013
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE The aim of our study was to determine whether ZFP57 alterations were a genetic cause of the hypomethylation at KCNQ1OT1 DMR in patients with BWS. 21863059 2012
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE In both patients genetic screening revealed hypomethylation of the KCNQ1OT1 gene, well-known for its association with the Beckwith-Wiedemann syndrome. 22610651 2012
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE The KCNQ1OT1 imprinting control region and non-coding RNA: new properties derived from the study of Beckwith-Wiedemann syndrome and Silver-Russell syndrome cases. 21920939 2012
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE BWS is speculated to occur primarily as the result of the misregulation of imprinted genes associated with two clusters on chromosome 11p15.5, namely the KvDMR1 and H19/IGF2. 23153226 2012
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 PosttranslationalModification disease BEFREE To facilitate the diagnosis of epigenetic errors and chromosomal imbalance of 11p15.5, we validated a pyrosequencing assay to measure methylation at KvDMR1 using blood samples from 13 BWS cases, 8 of which showed reduced methylation as compared to control blood. 20507345 2011
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE Because microsatellite analysis furthermore revealed a normal biparental karyotype for chromosome 11, our results point to an exclusive correlation of the observed BWS symptoms to locally restricted epimutations at the KvDMR1 of the maternal chromosome. 20618351 2011
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 Biomarker disease BEFREE In total 6/90 (6.67%) were shown to have a methylation defect, 2 of which were associated with known imprinting disorders: 1 patient had isolated hypomethylation at IGF2P0, an atypical epigenotype associated with Russell-Silver syndrome, and 1 showed hypomethylation at KvDMR consistent with a diagnosis of Beckwith-Wiedemann syndrome. 20635366 2010
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE We assessed the added diagnostic value of combined LIT1 and H19 testing in a large series of referred samples from 1298 patients, including 53 well-characterized patients from the St. Louis Children's Hospital BWS-Registry (validation samples) and 1245 consecutive nationwide referrals (practice samples). 20616360 2010
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 PosttranslationalModification disease BEFREE Determination of KCNQ1OT1 and H19 methylation levels in BWS and SRS patients using methylation-sensitive high-resolution melting analysis. 18854861 2009
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.600 GeneticVariation disease BEFREE We report a cohort of 149 patients with a clinical diagnosis of Beckwith-Wiedemann syndrome (BWS), including 81 with maternal hypomethylation of the KCNQ1OT1 ICR. 19092779 2009