Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE Inherited biallelic mutations of the ATM (ataxia-telangiectasia mutated) gene cause ataxia-telangiectasia, a rare autosomal recessive disorder associated with a high incidence of childhood leukaemias and lymphomas, suggesting that ATM gene alterations may be involved in lymphomagenesis. 14628072 2004
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE ATM mutations have been reported in adult sporadic lymphoma and leukaemia. 14735203 2004
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE However, surveys of the ATM mutation status in lymphoma have been limited due to the large size (62 exons) and complex mutational spectrum of this gene. 12697903 2003
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE The mutations in the ATM gene may be involved in the development of some subtypes of sporadic lymphomas and leukemias. 17516749 2007
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE We have found previously an overrepresentation (3.4%) of ATM mutations in a subset of 88 selected breast cancer patients with a family history of breast cancer, leukemia, and lymphoma. 9537233 1998
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE Germ-line mutations in the ATM gene cause ataxia-telangiectasia (A-T), a multisystem disorder associated with predisposition to lymphoma and acute leukemia. 12149228 2002
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE The ATM gene deficient in ataxia-telangiectasia, a recessive multisystem disease associated with a high risk of lymphomas and leukemias, was found previously to be inactivated in a rare sporadic malignancy, T-cell prolymphocytic leukemia (T-PLL), which is often associated with cytogenetic aberrations of chromosome 14. 9622061 1998
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE A hemizygous ATM deletion was seen in 44% to 88% of the interphase cells in 15 cases (11.1%); four patients had an indolent lymphoma (follicular center cell lymphoma), and 11 patients had an aggressive lymphoma (five mantle-cell lymphomas [MCLs] and six diffuse large-cell lymphomas). 10893293 2000
Entrez Id: 472
Gene Symbol: ATM
ATM
0.900 GeneticVariation group BEFREE Mutation of the ATM gene is not involved in the pathogenesis of either follicle center lymphoma or its transformation to higher-grade lymphoma. 12148890 2002
Entrez Id: 5551
Gene Symbol: PRF1
PRF1
0.620 GeneticVariation group BEFREE Our findings substantiate and expand the spectrum of clinical presentations of perforin deficiency, linking PRF1 missense mutations to lymphoma susceptibility and highlighting clinical variability within families. 26184781 2015
Entrez Id: 5551
Gene Symbol: PRF1
PRF1
0.620 GeneticVariation group BEFREE Mutations of its gene, PRF1, cause familial hemophagocytic lymphohistiocytosis but have also been associated with lymphomas and the autoimmune/lymphoproliferative syndrome. 18198357 2008
Entrez Id: 7454
Gene Symbol: WAS
WAS
0.610 GeneticVariation group BEFREE In the absence of WASP, active GTP-bound CDC42 was increased and the genetic deletion of one CDC42 allele was sufficient to impair lymphoma growth. 30510251 2019
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.500 GeneticVariation group BEFREE Overexpression and gain-of-function mutations in EZH2 are regarded as oncogenic drivers in lymphoma and other malignancies due to the silencing of tumor suppressors and differentiation genes. 31419226 2019
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE When compared to two large published DTHL cohorts, t(3;8)(q27;q24) lymphomas less often expressed BCL2 (P < .01), had a greater likelihood of extranodal involvement (P < .01), and more frequently appeared triple-hit by FISH analysis (P < .01). 29902576 2018
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.500 GeneticVariation group BEFREE MYD88 was the most frequently altered gene in our cohort, with potentially clinically relevant hotspot gain-of-function mutations identified in 71% of diffuse large B-cell lymphomas and 25% of marginal zone lymphomas. 27102345 2016
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.500 GeneticVariation group BEFREE Based on our recommendations, we systematically characterized all new cell lines that we generated by a standardized approach that included (1) determination of human origin, (2) exclusion of lymphoma, (3) DNA fingerprinting and histological comparisons to establish linkage to presumed tissue of origin, (4) examining thyroid differentiation by screening two to three thyroid markers, (5) examination of biological behavior (growth rate, tumorigenicity), and (6) presence of common thyroid cancer genetic changes (TP53, BRAF, PTEN, PIK3CA, RAS, TERT promoter, RET/PTC, PAX8/PPARγ, NF1, and EIF1AX). 29846633 2018
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE Our aims are to document if bcl-2 gene rearrangement exists in Jordanian FL and DLBCL, and if present to determine whether its frequency among these lymphomas is different from the West and therefore may be responsible for some of the epidemiological differences seen between Jordan and the West. 15770300 2005
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.500 GeneticVariation group BEFREE Mutation of EZH2 Y641 is described in lymphoma and results in enhanced activity, whereas inactivating mutations are seen in poor prognosis myeloid neoplasms. 21367748 2011
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE Here, we review the currently available data about the incidence, biological effects, and possible clinical importance of somatic mutations within the translocated bcl-2 genes of human lymphomas and leukemias. 8220113 1993
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE Lymphoma viability remained unaffected by the genetic deletion or pharmacological inhibition of all alternative BCL-2 family members. 27055871 2016
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE Aggressive lymphomas with MYC and BCL2 and/or BCL6 translocations ("double hit" lymphomas, DHL) represent a distinct diagnostic category in the updated World Health Organization (WHO) classification. 29629947 2019
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE Thus, there is a marked deregulation of Bcl-2 when it is introduced into the Ig locus in t(14;18) lymphomas. 3500184 1987
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE The t(14;18) chromosomal translocation that results in the juxtaposition of the bcl-2 proto-oncogene with the heavy chain JH locus is a common cytogenetic abnormality in human lymphoma. 1884022 1991
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE We conclude that the CRE site functions as a positive regulatory site for the translocated bcl-2 allele in t(14;18) lymphomas. 8798441 1996
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.500 GeneticVariation group BEFREE Breakpoints of a lymphoma case with bcl-2 gene rearrangement that did not show comigration of immunoglobulin (Ig) heavy chain joining (JH) fragment were cloned. 1900270 1991