Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2006
Gene Symbol: ELN
ELN
0.010 GeneticVariation disease BEFREE 20.7% of PV patients were considered as HU-resistant or intolerant when using the original ELN criteria. 30919072 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.010 GeneticVariation disease BEFREE SF3B1+ cases were enriched in primary myelofibrosis in both prefibrotic and fibrotic stage, but mutations of SF3B1 seem to occur only as a late event in the fibrotic phase of essential thrombocythemia and polycythemia vera. 30594750 2019
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.010 AlteredExpression disease BEFREE These results indicated that PV dominantly expressed β-catenin and proliferation marker Ki67 in bone marrow, while PMF is linked preferentially to PPAR-γ immunopositive megakaryocytes characterized by abnormal maturation. 30582392 2019
Entrez Id: 3980
Gene Symbol: LIG3
LIG3
0.010 AlteredExpression disease BEFREE LIG3 as an essential part of the SSB was significantly lower expressed compared to controls in all three entities (essential thrombocythemia (ET), polycythemia vera (PV), and myelofibrosis (MF)). 31748924 2019
Entrez Id: 5609
Gene Symbol: MAP2K7
MAP2K7
0.010 Biomarker disease BEFREE Accordingly, screening of FDA-approved compounds showed increased PV sensitivity to JAK, cKIT, and MEK inhibitors. 31824842 2019
Entrez Id: 7097
Gene Symbol: TLR2
TLR2
0.010 Biomarker disease BEFREE Finally, by using knockout mice, we demonstrated that TLR2 and IFN type I play crucial roles in modulating the early neuroinflammatory response and clinical outcome of PRV infection in mice. 31675371 2019
Entrez Id: 1843
Gene Symbol: DUSP1
DUSP1
0.010 Biomarker disease BEFREE Our results indicate that the JAK2V617F<sup>+</sup> PV progenitors utilize DUSP1 activity as a protection mechanism against DNA damage accumulation, promoting their proliferation and survival in the inflammatory microenvironment, identifying DUSP1 as a potential therapeutic target in PV. 30967632 2019
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.010 AlteredExpression disease BEFREE We found that JAK1/2 or JAK2 inhibition prevented the IL-6 activation of STAT3 and AKT pathways in polycythemia vera and HEL cells. 30571852 2019
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.010 AlteredExpression disease BEFREE We identify mutational cooperation between Jak2V617F expression and Dnmt3a loss that drives progression from early-stage polycythemia vera to advanced myelofibrosis. 30366920 2018
Entrez Id: 149420
Gene Symbol: PDIK1L
PDIK1L
0.010 GeneticVariation disease BEFREE By inhibiting casein kinase 1 (CK-1), we provoked keratin alterations resembling the effects of PV-IgG. 29922278 2018
Entrez Id: 6696
Gene Symbol: SPP1
SPP1
0.010 AlteredExpression disease BEFREE We assessed SPP1 and LGALS3 protein levels in 115 PMF, 47 ET and 24 PV patients plasma samples and we found that SPP1 plasma levels are significantly higher in PMF compared with ET and PV patients. 28745329 2018
Entrez Id: 940
Gene Symbol: CD28
CD28
0.010 AlteredExpression disease BEFREE We show that the peripheral CD3<sup>+</sup>CD8<sup>+</sup> T cell pool in PV patients is clearly divided into two discrete populations, a more granular CD3<sup>+</sup>CD8<sup>high</sup> T cell population enriched in effector-memory CD45RA<sup>+</sup> T cells (CD8<sup>+</sup> TEMRA) when compared to CTR (P < 0.001), and a less granular CD3<sup>+</sup>CD8<sup>int</sup> T cell population that is completely absent in the CTR group (78 vs. 0%, P < 0.001) and is a mixture of naïve (CD8<sup>+</sup> T<sub>N</sub>) and CD8<sup>+</sup> TEMRA cells expressing intermediate levels of CD28, i.e., CD3<sup>+</sup>CD8<sup>int</sup>CD28<sup>int</sup>. 29789880 2018
Entrez Id: 177
Gene Symbol: AGER
AGER
0.010 PosttranslationalModification disease BEFREE TLR4/RAGE blocking prevented the S100A8/9-mediated inhibition of ERK1/2 phosphorylation in PV. 29946821 2018
Entrez Id: 151176
Gene Symbol: ERFE
ERFE
0.010 AlteredExpression disease BEFREE Both decreased circulating iron and increased erythroferrone levels, which occur as a consequence of erythroid hyperplasia in PV, are anticipated to suppress hepcidin and enable recovery from iron deficiency. 30042411 2018
Entrez Id: 221037
Gene Symbol: JMJD1C
JMJD1C
0.010 Biomarker disease BEFREE JMJD1C binding to the <i>NFE2</i> promoter is increased in PV patients, decreasing both H3K9me2 levels and binding of the repressive heterochromatin protein-1α (HP1α). 29519804 2018
Entrez Id: 3661
Gene Symbol: IRF3
IRF3
0.010 Biomarker disease BEFREE Investigation of the molecular mechanisms of ENPP1 during PRV infection showed that ENPP1 hydrolyzed cGAMP in PRV-infected or cGAMP-transfected cells and inhibited IRF3 phosphorylation, reducing IFN-β secretion. 29407577 2018
Entrez Id: 3107
Gene Symbol: HLA-C
HLA-C
0.010 AlteredExpression disease BEFREE Finally, we report that PV patients' lymphocytes and monocytes display lower levels of closed (W6/32<sup>+</sup>) MHC-I conformers at the cell surface while exhibiting increased amounts of open (HC-10<sup>+</sup>) MHC-I conformers. 29789880 2018
Entrez Id: 22943
Gene Symbol: DKK1
DKK1
0.010 GeneticVariation disease BEFREE The results suggested that plasma Dkk-1 levels could differentiate ET from pre-PMF, in JAK2 V617F-positive as well as in CALR-positive patients, and also ET from PV in JAK2 V617F-positive patients. 29975001 2018
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 GeneticVariation disease BEFREE Mutations in the ENG, ACVRL1, and SMAD4 genes and clinical manifestations of hereditary haemorrhagic telangiectasia: experience from the Center for Osler's Disease, Uppsala University Hospital. 30251589 2018
Entrez Id: 6283
Gene Symbol: S100A12
S100A12
0.010 AlteredExpression disease BEFREE The S100A8 plasma levels were found to be increased in MPN, the S100A9 plasma levels in PMF and essential thrombocythemia (ET), and the S100A12 plasma levels in polycythemia vera (PV). 29946821 2018
Entrez Id: 6280
Gene Symbol: S100A9
S100A9
0.010 AlteredExpression disease BEFREE The S100A8 plasma levels were found to be increased in MPN, the S100A9 plasma levels in PMF and essential thrombocythemia (ET), and the S100A12 plasma levels in polycythemia vera (PV). 29946821 2018
Entrez Id: 48
Gene Symbol: ACO1
ACO1
0.010 GeneticVariation disease BEFREE A novel splicing site IRP1 somatic mutation in a patient with pheochromocytoma and JAK2<sup>V617F</sup> positive polycythemia vera: a case report. 29534684 2018
Entrez Id: 5167
Gene Symbol: ENPP1
ENPP1
0.010 Biomarker disease BEFREE These results, combined with those for porcine cGAS, demonstrate that ENPP1 acts coordinately with cGAS to maintain the reservoir of cGAMP and participates in PRV infection. 29407577 2018
Entrez Id: 27152
Gene Symbol: INTU
INTU
0.010 Biomarker disease BEFREE Cellular responses of an established cell line from human intestinal epithelial cells (INT-407 cells) against poliovirus (PV) infections were investigated in order to find cellular genetic markers for infectious PV detection. 29078036 2018
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.010 AlteredExpression disease BEFREE The S100A8 plasma levels were found to be increased in MPN, the S100A9 plasma levels in PMF and essential thrombocythemia (ET), and the S100A12 plasma levels in polycythemia vera (PV). 29946821 2018