Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.320 GeneticVariation disease BEFREE Herein, we describe a novel case of chondroma arising from the spinal dura mater, with mutation analysis of IDH1 and IDH2 both of which revealed wild-type. 27461824 2016
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.320 GeneticVariation disease BEFREE Herein, we describe a novel case of chondroma arising from the spinal dura mater, with mutation analysis of IDH1 and IDH2 both of which revealed wild-type. 27461824 2016
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.320 Biomarker disease CTD_human Inhibition of mutant IDH1 decreases D-2-HG levels without affecting tumorigenic properties of chondrosarcoma cell lines. 25895133 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.320 GeneticVariation disease BEFREE We here described clinical and pathological features in a new case of convexity dural chondroma with the wildtype IDH1/2 and expression of HMGA2 and reviewed the relevant literature. 25250651 2015
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.320 Biomarker disease CTD_human Inhibition of mutant IDH1 decreases D-2-HG levels without affecting tumorigenic properties of chondrosarcoma cell lines. 25895133 2015
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.320 GeneticVariation disease BEFREE IDH1 and IDH2 mutations are frequent events in central chondrosarcoma and central and periosteal chondromas but not in other mesenchymal tumours. 21598255 2011
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.320 Biomarker disease CTD_human Somatic mosaic IDH1 and IDH2 mutations are associated with enchondroma and spindle cell hemangioma in Ollier disease and Maffucci syndrome. 22057234 2011
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.320 Biomarker disease CTD_human Somatic mosaic IDH1 and IDH2 mutations are associated with enchondroma and spindle cell hemangioma in Ollier disease and Maffucci syndrome. 22057234 2011
Entrez Id: 8091
Gene Symbol: HMGA2
HMGA2
0.020 AlteredExpression disease BEFREE We here described clinical and pathological features in a new case of convexity dural chondroma with the wildtype IDH1/2 and expression of HMGA2 and reviewed the relevant literature. 25250651 2015
Entrez Id: 8091
Gene Symbol: HMGA2
HMGA2
0.020 AlteredExpression disease BEFREE HMGA2 was expressed in 4 of six soft tissue chondromas, all displaying 12q-rearrangements at cytogenetic analysis. 14614053 2003
Entrez Id: 8091
Gene Symbol: HMGA2
HMGA2
0.020 AlteredExpression disease LHGDN One soft tissue chondroma had a t(3;12)(q27;q15), and the RT-PCR analysis revealed an HMGA2-LPP fusion transcript, composed of HMGA2 exons 1-3 and LPP exons 9-11. 14614053 2003
Entrez Id: 92
Gene Symbol: ACVR2A
ACVR2A
0.010 GeneticVariation disease BEFREE The mutual exclusivity of ACVR2A rearrangements observed in synovial chondromatosis and FGFR1/2 in soft tissue chondromas suggests these represent separate entities. 31273315 2019
Entrez Id: 8074
Gene Symbol: FGF23
FGF23
0.010 AlteredExpression disease BEFREE However, unlike the latter, fibroblast growth factor 23 (FGF23) mRNA expression was not elevated in soft tissue chondromas harboring the FN1-FGFR1 fusion. 31273315 2019
Entrez Id: 6390
Gene Symbol: SDHB
SDHB
0.010 GeneticVariation disease BEFREE Of the five patients with chondromas showing SDHB loss, four had definitive Carney triad. 31236950 2019
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.010 Biomarker disease BEFREE The mutual exclusivity of ACVR2A rearrangements observed in synovial chondromatosis and FGFR1/2 in soft tissue chondromas suggests these represent separate entities. 31273315 2019
Entrez Id: 2335
Gene Symbol: FN1
FN1
0.010 GeneticVariation disease BEFREE However, unlike the latter, fibroblast growth factor 23 (FGF23) mRNA expression was not elevated in soft tissue chondromas harboring the FN1-FGFR1 fusion. 31273315 2019
Entrez Id: 2358
Gene Symbol: FPR2
FPR2
0.010 Biomarker disease BEFREE By tracing Cre-expressed tissues using a ROSA26-STOP-RFP allele, we found that the chondroma emitted RFP fluorescence, indicating that functional Cre is expressed in hyperplastic chondrocytes in Erk∆CD2-Cre mice. 29106539 2017
Entrez Id: 5987
Gene Symbol: TRIM27
TRIM27
0.010 Biomarker disease BEFREE By tracing Cre-expressed tissues using a ROSA26-STOP-RFP allele, we found that the chondroma emitted RFP fluorescence, indicating that functional Cre is expressed in hyperplastic chondrocytes in Erk∆CD2-Cre mice. 29106539 2017
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.010 Biomarker disease BEFREE Immunohistochemisty demonstrated that the chondrocytes with functional EXT1 in MO were less than those in extragenetic solitary chondromas. 24009674 2013
Entrez Id: 860
Gene Symbol: RUNX2
RUNX2
0.010 AlteredExpression disease LHGDN Differential expression of runx2 and Indian hedgehog in cartilaginous tumors. 17387386 2007
Entrez Id: 3177
Gene Symbol: SLC29A2
SLC29A2
0.010 GeneticVariation disease BEFREE Whereas the chondroma displayed the relatively simple karyotype 46,XY,add(12)(q13),der(17)t(12;17)(q13;q21), more complex changes were found in the three cases of chondromatosis: case 1, 47,XY,der(1)inv(1)(p13q25)del (1)(q25q32), t(1;12)(q25;q13), + 5,der(12)add(12)(p11)t(1;12)(p22;q13); case 2, 47,XY,add(10)(q26), + 20/46 idem,-6/46,XY,t(2;4)(q33;q21), add(21)(p11); and case 3, 44,XY,add(1)(p36), del(1)(p13p22),add(6)(p25), del(7) (q22q32),del(10)(q21),add(11)(q13),-17,-18. 8688330 1996