Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.020 Biomarker disease BEFREE The method is then applied to the PETACC-8 trial that compares the efficacy of chemotherapy with a combined chemotherapy + anti-epidermal growth factor receptor in stage III colorectal cancer. 30599802 2020
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 Biomarker disease BEFREE Lower CA125 (⩽ 35 u/ml, P= 0.0015) serum levels, stage IIIa (P= 0.0027), 1-3 positive lymph nodes (P= 0.0256), negative vascular invasion (P= 0.0215), lower CA199 (⩽ 27 u/ml, P= 0.0038) serum levels, and wild-type BRAF status (P= 0.0125) were significantly associated with a higher 2-year DFS rate in patients with stage III colorectal cancer. 29562502 2018
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.020 AlteredExpression disease BEFREE EGFR expression in patients with stage III colorectal cancer after adjuvant chemotherapy and on cancer cell function. 29383110 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 Biomarker disease BEFREE Combined microsatellite instability and BRAF gene status as biomarkers for adjuvant chemotherapy in stage III colorectal cancer. 25154726 2014
Entrez Id: 7150
Gene Symbol: TOP1
TOP1
0.020 GeneticVariation disease BEFREE Mechanisms of topoisomerase I (TOP1) gene copy number increase in a stage III colorectal cancer patient cohort. 23577133 2013
Entrez Id: 2068
Gene Symbol: ERCC2
ERCC2
0.020 GeneticVariation disease BEFREE To determine the correlation between expression of three DNA repair genes and early failure/clinical outcome of stage III colorectal cancer (CRC) patients administrated with FOLFOX-4, including the excision repair cross-complementation group 1 (ERCC1), the excision repair cross-complementing 2 (ERCC2), and X-ray repair cross-complementing protein 1 (XRCC1). 23996617 2013
Entrez Id: 2067
Gene Symbol: ERCC1
ERCC1
0.020 Biomarker disease BEFREE An explorative analysis of ERCC1-19q13 copy number aberrations in a chemonaive stage III colorectal cancer cohort. 24144331 2013
Entrez Id: 7150
Gene Symbol: TOP1
TOP1
0.020 GeneticVariation disease BEFREE Topoisomerase 1(TOP1) gene copy number in stage III colorectal cancer patients and its relation to prognosis. 23110915 2013
Entrez Id: 2067
Gene Symbol: ERCC1
ERCC1
0.020 GeneticVariation disease BEFREE To determine the correlation between expression of three DNA repair genes and early failure/clinical outcome of stage III colorectal cancer (CRC) patients administrated with FOLFOX-4, including the excision repair cross-complementation group 1 (ERCC1), the excision repair cross-complementing 2 (ERCC2), and X-ray repair cross-complementing protein 1 (XRCC1). 23996617 2013
Entrez Id: 2068
Gene Symbol: ERCC2
ERCC2
0.020 GeneticVariation disease BEFREE ERCC2 2251A>C genetic polymorphism was highly correlated with early relapse in high-risk stage II and stage III colorectal cancer patients: a preliminary study. 18267032 2008
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 AlteredExpression disease BEFREE Here, we examined the predictive utility of TP53 overexpression in the context of current adjuvant treatment practice for patients with stage III colorectal cancer. 31471586 2020
Entrez Id: 695
Gene Symbol: BTK
BTK
0.010 Biomarker disease BEFREE Role of Bruton's Tyrosine Kinase in Stage III Colorectal Cancer. 31238520 2019
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.010 Biomarker disease BEFREE RNA sequencing reveals PNN and KCNQ1OT1 as predictive biomarkers of clinical outcome in stage III colorectal cancer patients treated with adjuvant chemotherapy. 30973654 2019
Entrez Id: 94025
Gene Symbol: MUC16
MUC16
0.010 AlteredExpression disease BEFREE Lower CA125 (⩽ 35 u/ml, P= 0.0015) serum levels, stage IIIa (P= 0.0027), 1-3 positive lymph nodes (P= 0.0256), negative vascular invasion (P= 0.0215), lower CA199 (⩽ 27 u/ml, P= 0.0038) serum levels, and wild-type BRAF status (P= 0.0125) were significantly associated with a higher 2-year DFS rate in patients with stage III colorectal cancer. 29562502 2018
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.010 AlteredExpression disease BEFREE Prognostic value of programmed death-ligand 1 expression in patients with stage III colorectal cancer. 28267224 2017
Entrez Id: 1084
Gene Symbol: CEACAM3
CEACAM3
0.010 AlteredExpression disease BEFREE Multivariate analyses of patients with Stage III colorectal cancer found IMPC to be associated with significantly worse DFS (P = 0.026), as were high CEA levels, tumor budding and TNM staging. 29036423 2017
Entrez Id: 5670
Gene Symbol: PSG2
PSG2
0.010 AlteredExpression disease BEFREE Multivariate analyses of patients with Stage III colorectal cancer found IMPC to be associated with significantly worse DFS (P = 0.026), as were high CEA levels, tumor budding and TNM staging. 29036423 2017
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker disease BEFREE We assessed the prognostic potential of an experimentally validated, mathematical model of BCL-2 protein interactions (DR_MOMP) in patients with stage III colorectal cancer (CRC). 27663504 2017
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 Biomarker disease BEFREE In this discovery and validation study, we evaluated the suitability of a mathematical model of apoptosis execution (APOPTO-CELL) as a stand-alone signature and as a constituent of further refined prognostic stratification tools.<b>Experimental Design:</b> Apoptosis competency of primary tumor samples from patients with stage III colorectal cancer (<i>n</i> = 120) was calculated by APOPTO-CELL from measured protein concentrations of Procaspase-3, Procaspase-9, SMAC, and XIAP. 27649552 2017
Entrez Id: 1048
Gene Symbol: CEACAM5
CEACAM5
0.010 AlteredExpression disease BEFREE Multivariate analyses of patients with Stage III colorectal cancer found IMPC to be associated with significantly worse DFS (P = 0.026), as were high CEA levels, tumor budding and TNM staging. 29036423 2017
Entrez Id: 1087
Gene Symbol: CEACAM7
CEACAM7
0.010 AlteredExpression disease BEFREE Multivariate analyses of patients with Stage III colorectal cancer found IMPC to be associated with significantly worse DFS (P = 0.026), as were high CEA levels, tumor budding and TNM staging. 29036423 2017
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.010 GeneticVariation disease BEFREE Extended RAS (KRAS/NRAS) mutations are proposed as predictive indicators with respect to the efficacy of adjuvant UFT chemotherapy in patients with resected stage III colorectal cancer. 27089049 2016
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.010 GeneticVariation disease BEFREE Extended RAS (KRAS/NRAS) mutations are proposed as predictive indicators with respect to the efficacy of adjuvant UFT chemotherapy in patients with resected stage III colorectal cancer. 27089049 2016
Entrez Id: 79623
Gene Symbol: GALNT14
GALNT14
0.010 Biomarker disease BEFREE GALNT14 Genotype Predicts Postoperative Outcome of Stage III Colorectal Cancer With Oxaliplatin as Adjuvant Chemotherapy. 27124048 2016
Entrez Id: 4659
Gene Symbol: PPP1R12A
PPP1R12A
0.010 Biomarker disease BEFREE Our findings suggest the copy number of PPP1R12A can independently predict recurrence and overall survival of stage III colorectal cancer patients receiving oxaliplatin-based chemotherapy. 26113782 2015