Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs9277535
rs9277535
HLA-DPB1
13 0.724 0.440 6 33087084 3 prime UTR variant A/G snv 0.25 0.900 0.917 24 2009 2018
dbSNP: rs3077
rs3077
HLA-DPA1
16 0.701 0.440 6 33065245 3 prime UTR variant A/G snv 0.29 0.900 0.913 23 2009 2019
dbSNP: rs7453920
rs7453920
HLA-DQB2
10 0.752 0.440 6 32762235 intron variant A/G;T snv 0.880 0.909 11 2011 2017
dbSNP: rs2856718
rs2856718 		8 0.790 0.360 6 32702478 downstream gene variant C/T snv 0.34 0.860 1.000 8 2011 2017
dbSNP: rs4821116
rs4821116
UBE2L3
3 0.925 0.120 22 21619030 intron variant C/A;T snv 0.18 0.820 1.000 2 2013 2018
dbSNP: rs11866328
rs11866328
GRIN2A
3 0.925 0.120 16 9768699 intron variant G/T snv 0.38 0.810 1.000 1 2011 2011
dbSNP: rs3130542
rs3130542 		8 0.827 0.160 6 31264334 downstream gene variant A/G snv 0.81 0.810 1.000 1 2013 2013
dbSNP: rs1419881
rs1419881
TCF19
4 0.851 0.280 6 31162816 3 prime UTR variant G/A snv 0.50 0.800 1.000 1 2013 2013
dbSNP: rs652888
rs652888
CYP21A2 ; EHMT2 ; EHMT2-AS1 ; LOC107986588
10 0.776 0.480 6 31883457 non coding transcript exon variant A/G snv 0.18 0.20 0.800 1.000 1 2013 2013
dbSNP: rs17401966
rs17401966
KIF1B
7 0.790 0.280 1 10325413 intron variant A/G snv 0.24 0.730 0.750 4 2011 2019
dbSNP: rs738409
rs738409
PNPLA3
88 0.557 0.720 22 43928847 missense variant C/G snv 0.28 0.22 0.730 1.000 4 2011 2019
dbSNP: rs3128917
rs3128917
HLA-DPA2
2 0.925 0.200 6 33092219 non coding transcript exon variant T/G snv 0.33 0.720 1.000 4 2009 2019
dbSNP: rs2395309
rs2395309 		2 0.925 0.200 6 33058469 regulatory region variant A/G;T snv 0.28 0.710 1.000 4 2009 2013
dbSNP: rs1042169
rs1042169
HLA-DPA1 ; HLA-DPB1
1 1.000 0.080 6 33080909 missense variant G/A;T snv 0.31; 1.4E-02 0.710 1.000 3 2013 2019
dbSNP: rs3135021
rs3135021
HLA-DPA1 ; HLA-DPB1
2 0.925 0.080 6 33077781 intron variant G/A snv 0.32 0.710 0.667 3 2009 2016
dbSNP: rs9277542
rs9277542
HLA-DPB1
4 0.851 0.280 6 33087470 3 prime UTR variant T/A;C snv 0.710 1.000 3 2012 2016
dbSNP: rs9380343
rs9380343
HLA-DPB2
1 1.000 0.080 6 33111389 upstream gene variant C/T snv 4.8E-02 0.710 1.000 3 2009 2019
dbSNP: rs59391722
rs59391722
UBE2L3
1 1.000 0.080 22 21566528 intron variant G/C snv 0.18 0.710 1.000 2 2013 2019
dbSNP: rs671
rs671
ALDH2
116 0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 0.710 1.000 2 2011 2019
dbSNP: rs7770370
rs7770370
HLA-DPA1 ; HLA-DPB1
2 0.925 0.160 6 33081144 non coding transcript exon variant A/G snv 0.27 0.710 1.000 2 2013 2015
dbSNP: rs9276370
rs9276370
HLA-DQA2
3 0.882 0.200 6 32739518 upstream gene variant G/T snv 0.51 0.710 1.000 2 2011 2014
dbSNP: rs9277378
rs9277378
HLA-DPA1 ; HLA-DPB1
5 0.827 0.320 6 33082502 intron variant A/G snv 0.40 0.710 1.000 2 2013 2013
dbSNP: rs9277471
rs9277471
HLA-DPB1
1 1.000 0.080 6 33085905 missense variant G/A;C snv 0.32; 4.1E-06 0.710 1.000 2 2013 2016
dbSNP: rs9277534
rs9277534
HLA-DPB1
7 0.790 0.280 6 33087030 3 prime UTR variant A/G snv 0.38 0.710 0.500 2 2013 2018
dbSNP: rs7756516
rs7756516
HLA-DQB2
4 0.851 0.280 6 32756140 3 prime UTR variant C/T snv 0.49 0.710 1.000 1 2014 2014