Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs10759932
rs10759932
TLR4
15 0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18 0.010 < 0.001 1 2016 2016
dbSNP: rs1136410
rs1136410
PARP1
70 0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 0.010 < 0.001 1 2009 2009
dbSNP: rs11539752
rs11539752
GZMB ; LOC107984667
6 0.882 0.120 14 24632383 missense variant G/C snv 0.21 0.26 0.010 < 0.001 1 2015 2015
dbSNP: rs1222213359
rs1222213359
VEGFA
62 0.574 0.720 6 43770966 missense variant G/A snv 0.010 < 0.001 1 2008 2008
dbSNP: rs1238788540
rs1238788540
BRAF
2 0.925 0.080 7 140800368 missense variant G/C snv 4.0E-06 7.0E-06 0.010 < 0.001 1 2009 2009
dbSNP: rs12527379
rs12527379 		1 1.000 0.080 6 131958700 intron variant G/A snv 0.31 0.010 < 0.001 1 2015 2015
dbSNP: rs1800734
rs1800734
MLH1 ; EPM2AIP1
30 0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 0.010 < 0.001 1 2017 2017
dbSNP: rs2032582
rs2032582
ABCB1
97 0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 0.010 < 0.001 1 2009 2009
dbSNP: rs2236338
rs2236338
GZMB
6 0.851 0.120 14 24631076 missense variant A/G snv 0.24 0.25 0.010 < 0.001 1 2015 2015
dbSNP: rs25487
rs25487
XRCC1
205 0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 0.010 < 0.001 1 2009 2009
dbSNP: rs25489
rs25489
XRCC1
78 0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 0.010 < 0.001 1 2009 2009
dbSNP: rs2770150
rs2770150 		4 0.925 0.080 9 117700861 upstream gene variant A/G snv 0.22 0.010 < 0.001 1 2016 2016
dbSNP: rs41395947
rs41395947
ABCC1
2 0.925 0.080 16 16007895 missense variant G/C snv 2.0E-05 7.0E-06 0.010 < 0.001 1 2019 2019
dbSNP: rs4696480
rs4696480
TLR2
19 0.716 0.400 4 153685974 intron variant T/A snv 0.45 0.010 < 0.001 1 2018 2018
dbSNP: rs4987188
rs4987188
MSH2
11 0.790 0.200 2 47416318 missense variant G/A;T snv 1.3E-02; 2.0E-05 0.010 < 0.001 1 2017 2017
dbSNP: rs5273
rs5273
PTGS2
6 0.827 0.080 1 186674636 missense variant A/C;G snv 4.0E-06; 7.6E-03 1.4E-02 0.010 < 0.001 1 2006 2006
dbSNP: rs55819519
rs55819519
TP53
40 0.627 0.400 17 7673751 missense variant C/A;G;T snv 1.6E-04 1.3E-04 0.010 < 0.001 1 2009 2009
dbSNP: rs60745952
rs60745952
LOC105377481 ; LOC107986195
6 0.925 0.080 4 148827842 intron variant T/C snv 0.13 0.010 < 0.001 1 2016 2016
dbSNP: rs777980327
rs777980327
APC
21 0.716 0.280 5 112837567 missense variant A/T snv 4.0E-06 7.0E-06 0.010 < 0.001 1 2007 2007
dbSNP: rs1045642
rs1045642
ABCB1
214 0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 0.040 0.500 4 2005 2009
dbSNP: rs1052133
rs1052133
OGG1 ; CAMK1
147 0.476 0.800 3 9757089 missense variant C/G snv 0.27 0.22 0.040 0.500 4 2003 2013
dbSNP: rs4986790
rs4986790
TLR4
223 0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 0.020 0.500 2 2011 2016
dbSNP: rs1805192
rs1805192
PPARG
121 0.510 0.840 3 12379739 missense variant C/G snv 0.030 0.667 3 2005 2010
dbSNP: rs1801282
rs1801282
PPARG
131 0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 0.040 0.750 4 2005 2017
dbSNP: rs876658657
rs876658657
MLH1
25 0.677 0.280 3 37020356 missense variant A/G snv 4.0E-06 0.040 0.750 4 2008 2017