Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
121 0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 0.710 1.000 2 2018 2019
dbSNP: rs689
rs689
INS ; INS-IGF2
9 0.776 0.280 11 2160994 splice region variant A/T snv 0.73 0.60 0.710 1.000 2 2018 2019
dbSNP: rs11755527
rs11755527
BACH2
5 0.851 0.360 6 90248512 intron variant C/G snv 0.36 0.700 1.000 1 2018 2018
dbSNP: rs1983890
rs1983890
LOC101928080
1 1.000 0.120 10 6136651 regulatory region variant C/T snv 0.37 0.700 1.000 1 2018 2018
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
92 0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 0.700 1.000 1 2018 2018
dbSNP: rs9273368
rs9273368
HLA-DQB1-AS1
3 0.882 0.120 6 32658698 upstream gene variant G/A snv 0.23 0.700 1.000 1 2018 2018
dbSNP: rs7903146
rs7903146
TCF7L2
93 0.554 0.680 10 112998590 intron variant C/G;T snv 0.020 1.000 2 2019 2019
dbSNP: rs16840252
rs16840252
CTLA4
8 0.776 0.480 2 203866796 upstream gene variant C/T snv 0.16 0.010 1.000 1 2009 2009
dbSNP: rs231806
rs231806 		2 0.925 0.120 2 203844626 intergenic variant C/G;T snv 0.010 1.000 1 2009 2009
dbSNP: rs237025
rs237025
TAB2 ; SUMO4
26 0.672 0.360 6 149400554 missense variant G/A snv 0.55 0.57 0.010 < 0.001 1 2006 2006
dbSNP: rs5742909
rs5742909
CTLA4
40 0.614 0.680 2 203867624 upstream gene variant C/T snv 6.7E-02 0.010 1.000 1 2009 2009
dbSNP: rs9939609
rs9939609
FTO
98 0.559 0.720 16 53786615 intron variant T/A snv 0.41 0.010 1.000 1 2019 2019