Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs197757
rs197757
ITGA9
1 1.000 0.120 3 37481337 intron variant G/A snv 0.14 0.700 1.000 1 2009 2009
dbSNP: rs2212020
rs2212020
ITGA9
1 1.000 0.120 3 37475971 intron variant C/T snv 0.34 0.710 1.000 1 2009 2009
dbSNP: rs29218
rs29218 		1 1.000 0.120 6 29639652 upstream gene variant A/G snv 0.17 0.700 1.000 1 2009 2009
dbSNP: rs2975042
rs2975042
HLA-A
1 1.000 0.120 6 29952759 upstream gene variant G/A;T snv 0.700 1.000 1 2009 2009
dbSNP: rs3095267
rs3095267 		1 1.000 0.120 6 29639269 upstream gene variant G/C;T snv 0.700 1.000 1 2009 2009
dbSNP: rs3827688
rs3827688
CYP2E1 ; SYCE1
1 1.000 0.120 10 133555754 non coding transcript exon variant C/T snv 0.13 9.4E-02 0.010 1.000 1 2009 2009
dbSNP: rs4072111
rs4072111
IL16
16 0.716 0.400 15 81285798 missense variant C/T snv 0.17 0.11 0.010 1.000 1 2009 2009
dbSNP: rs533550179
rs533550179 		1 1.000 0.120 6 29714462 intergenic variant C/T snv 0.700 1.000 1 2009 2009
dbSNP: rs577078190
rs577078190 		1 1.000 0.120 6 29716031 intergenic variant G/A snv 0.700 1.000 1 2009 2009
dbSNP: rs8192780
rs8192780
CYP2E1
1 1.000 0.120 10 133540621 intron variant T/G snv 0.64 0.010 1.000 1 2009 2009
dbSNP: rs915908
rs915908
CYP2E1
2 0.925 0.160 10 133533455 intron variant G/A snv 0.12 0.010 1.000 1 2009 2009
dbSNP: rs9260484
rs9260484
HLA-A
1 1.000 0.120 6 29952476 upstream gene variant A/C snv 0.62 0.700 1.000 1 2009 2009
dbSNP: rs9418990
rs9418990
CYP2E1 ; LOC107984284
1 1.000 0.120 10 133524462 intron variant C/T snv 0.63 0.010 1.000 1 2009 2009
dbSNP: rs189897
rs189897
ITGA9
2 1.000 0.120 3 37477054 intron variant T/A snv 0.13 0.710 1.000 2 2009 2010
dbSNP: rs3131866
rs3131866 		1 1.000 0.120 6 29703963 downstream gene variant G/A snv 0.24 0.700 1.000 2 2009 2010
dbSNP: rs1016343
rs1016343
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
8 0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20 0.700 1.000 1 2010 2010
dbSNP: rs10411210
rs10411210
RHPN2
13 0.742 0.160 19 33041394 intron variant C/T snv 0.22 0.700 1.000 1 2010 2010
dbSNP: rs10505477
rs10505477
POU5F1B ; CASC8 ; PCAT1
31 0.658 0.400 8 127395198 intron variant A/G snv 0.40 0.700 1.000 1 2010 2010
dbSNP: rs1051730
rs1051730
CHRNA3
43 0.641 0.600 15 78601997 synonymous variant G/A snv 0.27 0.26 0.700 1.000 1 2010 2010
dbSNP: rs10795668
rs10795668
LOC105376400
17 0.724 0.160 10 8659256 upstream gene variant G/A snv 0.24 0.700 1.000 1 2010 2010
dbSNP: rs10821936
rs10821936
ARID5B
11 0.742 0.200 10 61963818 intron variant C/T snv 0.69 0.700 1.000 1 2010 2010
dbSNP: rs10896449
rs10896449 		7 0.827 0.200 11 69227200 intergenic variant A/G snv 0.53 0.700 1.000 1 2010 2010
dbSNP: rs10934853
rs10934853
EEFSEC
3 0.882 0.160 3 128319530 intron variant C/A snv 0.43 0.700 1.000 1 2010 2010
dbSNP: rs10993994
rs10993994
MSMB
15 0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54 0.700 1.000 1 2010 2010
dbSNP: rs11083846
rs11083846
PRKD2
3 0.882 0.200 19 46704397 splice region variant G/A snv 0.17 0.16 0.700 1.000 1 2010 2010