Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs7850258
rs7850258
PTCSC2
0.820 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370

2019
dbSNP: rs7850258
rs7850258
PTCSC2
0.820 GeneticVariation BEFREE Quantitative reporter assays in oral epithelial and thyroid cell lines show that the rs7850258 allele (G) associated with CLP and hypothyroidism has significantly greater enhancer activity than the allele associated with thyroid cancer (A). 25652407

2015
dbSNP: rs7850258
rs7850258
PTCSC2
0.820 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs7850258
rs7850258
PTCSC2
0.820 GeneticVariation GWASDB Four single-nucleotide polymorphisms (SNPs) in linkage disequilibrium at 9q22 near FOXE1 were associated with hypothyroidism at genome-wide significance, the strongest being rs7850258 (odds ratio [OR] 0.74, p = 3.96 × 10(-9)). 21981779

2011
dbSNP: rs7850258
rs7850258
PTCSC2
0.820 GeneticVariation GWASCAT Four single-nucleotide polymorphisms (SNPs) in linkage disequilibrium at 9q22 near FOXE1 were associated with hypothyroidism at genome-wide significance, the strongest being rs7850258 (odds ratio [OR] 0.74, p = 3.96 × 10(-9)). 21981779

2011
dbSNP: rs7850258
rs7850258
PTCSC2
0.820 GeneticVariation BEFREE Four single-nucleotide polymorphisms (SNPs) in linkage disequilibrium at 9q22 near FOXE1 were associated with hypothyroidism at genome-wide significance, the strongest being rs7850258 (odds ratio [OR] 0.74, p = 3.96 × 10(-9)). 21981779

2011
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.800 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370

2019
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
0.800 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370

2019
dbSNP: rs17020055
rs17020055
VAV3
0.800 GeneticVariation GWASCAT Detection and interpretation of shared genetic influences on 42 human traits. 27182965

2016
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.800 GeneticVariation GWASCAT Detection and interpretation of shared genetic influences on 42 human traits. 27182965

2016
dbSNP: rs17020055
rs17020055
VAV3
0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs2517532
rs2517532 		G 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs2517532
rs2517532 		G 0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs3129720
rs3129720 		C 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs3129720
rs3129720 		C 0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
T 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
T 0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs4915077
rs4915077
VAV3
C 0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs4915077
rs4915077
VAV3
C 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs6679677
rs6679677
PHTF1
A 0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs6679677
rs6679677
PHTF1
A 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs925489
rs925489
PTCSC2
T 0.800 GeneticVariation GWASDB Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs925489
rs925489
PTCSC2
T 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012
dbSNP: rs948426
rs948426
LINC01387 ; LOC105371972
A 0.800 GeneticVariation GWASCAT Novel associations for hypothyroidism include known autoimmune risk loci. 22493691

2012