Disease: Parkinson Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs34637584
LRRK2
0.583 0.480 12 40340400 missense variant G/A snv 5.3E-04 3.6E-04 78
rs104893877
SNCA
0.614 0.360 4 89828149 missense variant C/T snv 59
rs121912438
SOD1
0.605 0.520 21 31667299 missense variant G/A;C;T snv 1.2E-05; 8.0E-06 58
rs75932628
LOC105375056 ; TREM2
0.662 0.480 6 41161514 missense variant C/A;T snv 6.8E-05; 2.6E-03 28
rs156697
GSTO2
0.672 0.560 10 104279427 missense variant A/G;T snv 0.35 25
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 25
rs1799990
PRNP
0.683 0.440 20 4699605 missense variant A/G snv 0.31 0.33 23
rs104893878
SNCA ; SNCA-AS1
0.732 0.160 4 89835580 missense variant C/G snv 21
rs143624519
MAPT
0.724 0.240 17 45991484 missense variant G/A;T snv 1.5E-03; 1.2E-05 17
rs5848
FAM171A2 ; GRN
0.708 0.120 17 44352876 3 prime UTR variant C/T snv 0.41 17
rs1990622 0.742 0.200 7 12244161 downstream gene variant A/G snv 0.52 16
rs121912443
SOD1
0.732 0.160 21 31663857 missense variant A/G snv 15
rs104893875
SNCA
0.742 0.120 4 89828170 missense variant C/T snv 4.0E-06 13
rs3173615
TMEM106B
0.807 0.200 7 12229791 missense variant C/A;G snv 0.49 12
rs121909329
VCP
0.763 0.200 9 35065363 missense variant C/A;G;T snv 11
rs5030732
UCHL1 ; UCHL1-AS1
0.790 0.160 4 41257616 missense variant C/A snv 0.24 0.16 10
rs431905511
SNCA
0.827 0.080 4 89828154 missense variant C/T snv 9
rs1052553
MAPT
0.827 0.200 17 45996523 synonymous variant A/G snv 0.14 0.15 8
rs34015634
LRRK2
0.851 0.120 12 40340380 missense variant T/C snv 3.2E-05 1.4E-05 8
rs35801418
LRRK2
0.827 0.120 12 40321114 missense variant A/G snv 7