Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
0.830 GeneticVariation BEFREE Moreover, we replicated the association between rs12191877 (HLA-C) and type I psoriasis and between type I and type II psoriasis. 26613086 2015
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
0.830 GeneticVariation BEFREE The results of the univariate analysis showed an association between rs10484879 and psoriasis, although this relationship disappeared after adjustment for HLA-C (rs12191877). 26415694 2015
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
0.830 GeneticVariation GWASCAT Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. 20953188 2010
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
0.830 GeneticVariation GWASDB Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. 20953188 2010
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
0.830 GeneticVariation BEFREE The most significant finding was for SNP rs12191877, which is in tight linkage disequilibrium with HLA-Cw*0602, the consensus risk allele for psoriasis. 19680446 2009
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
T 0.830 GeneticVariation GWASCAT Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways. 19169254 2009
dbSNP: rs12191877
rs12191877
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0033860
Disease:
Psoriasis
T 0.830 GeneticVariation GWASDB Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways. 19169254 2009
dbSNP: rs9468925
rs9468925
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0042900
Disease:
Vitiligo
0.820 GeneticVariation BEFREE Allele G of rs9468925 on HLA-C-HLA-B may be associated with a higher risk of vitiligo. 21951294 2012
dbSNP: rs9468925
rs9468925
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0042900
Disease:
Vitiligo
0.820 GeneticVariation BEFREE More importantly we find that rs9468925 in HLA-C/HLA-B is associated with both psoriasis and vitiligo, providing first important evidence that two major skin diseases share a common genetic locus in the MHC, and a basis for elucidating the molecular mechanism of skin disorders. 22125590 2011
dbSNP: rs9468925
rs9468925
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0042900
Disease:
Vitiligo
0.820 GeneticVariation GWASDB Genome-wide association study for vitiligo identifies susceptibility loci at 6q27 and the MHC. 20526339 2010
dbSNP: rs9468925
rs9468925
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0042900
Disease:
Vitiligo
0.820 GeneticVariation GWASCAT Genome-wide association study for vitiligo identifies susceptibility loci at 6q27 and the MHC. 20526339 2010
dbSNP: rs10484554
rs10484554
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0033860
Disease:
Psoriasis
0.810 GeneticVariation BEFREE We investigated, in 461 psoriatic patients and 454 healthy controls, the associations with psoriasis of four single-nucleotide polymorphisms (SNPs) from the psoriasis susceptibility 1 (PSORS1) interval: rs1062470 (PSORS1C1/CDSN), rs887466 (PSORS1C3), rs2894207 and rs10484554 (LOC105375015). 29589160 2018
dbSNP: rs10484554
rs10484554
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0033860
Disease:
Psoriasis
T 0.810 GeneticVariation GWASCAT Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. 26626624 2015
dbSNP: rs10484554
rs10484554
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0033860
Disease:
Psoriasis
0.810 GeneticVariation GWASDB A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1. 20953190 2010
dbSNP: rs10484554
rs10484554
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0033860
Disease:
Psoriasis
0.810 GeneticVariation GWASCAT A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1. 20953190 2010
dbSNP: rs10484554
rs10484554
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0033860
Disease:
Psoriasis
T 0.810 GeneticVariation GWASCAT A genome-wide association study of psoriasis and psoriatic arthritis identifies new disease loci. 18369459 2008
dbSNP: rs10484554
rs10484554
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0033860
Disease:
Psoriasis
T 0.810 GeneticVariation GWASDB A genome-wide association study of psoriasis and psoriatic arthritis identifies new disease loci. 18369459 2008
dbSNP: rs2524079
rs2524079
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0023508
Disease:
White Blood Cell Count procedure
0.800 GeneticVariation GWASCAT Genetic analyses of diverse populations improves discovery for complex traits. 31217584 2019
dbSNP: rs2247056
rs2247056
Entrez Id: 3106;105375015;112267902
Gene Symbol: HLA-B;LINC02571;LOC112267902
HLA-B;LINC02571;LOC112267902
CUI: C0202236
Disease:
Triglycerides measurement
T 0.800 GeneticVariation GWASCAT A large electronic-health-record-based genome-wide study of serum lipids. 29507422 2018
dbSNP: rs2524079
rs2524079
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0023508
Disease:
White Blood Cell Count procedure
G 0.800 GeneticVariation GWASCAT Genome-wide association of white blood cell counts in Hispanic/Latino Americans: the Hispanic Community Health Study/Study of Latinos. 28158719 2017
dbSNP: rs2524079
rs2524079
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0023508
Disease:
White Blood Cell Count procedure
A 0.800 GeneticVariation GWASCAT The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease. 27863252 2016
dbSNP: rs3819299
rs3819299
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0032181
Disease:
Platelet Count measurement
G 0.800 GeneticVariation GWASCAT The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease. 27863252 2016
dbSNP: rs9264942
rs9264942
Entrez Id: 3106;112267902
Gene Symbol: HLA-B;LOC112267902
HLA-B;LOC112267902
CUI: C0010346
Disease:
Crohn Disease
0.800 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919 2015
dbSNP: rs2523608
rs2523608
Entrez Id: 3106;102465537
Gene Symbol: HLA-B;MIR6891
HLA-B;MIR6891
CUI: C0201910
Disease:
Beta-2-microglobulin measurement
A 0.800 GeneticVariation GWASCAT Genome-wide association study identified the human leukocyte antigen region as a novel locus for plasma beta-2 microglobulin. 23417110 2013
dbSNP: rs2523608
rs2523608
Entrez Id: 3106;102465537
Gene Symbol: HLA-B;MIR6891
HLA-B;MIR6891
CUI: C0201910
Disease:
Beta-2-microglobulin measurement
A 0.800 GeneticVariation GWASDB Genome-wide association study identified the human leukocyte antigen region as a novel locus for plasma beta-2 microglobulin. 23417110 2013