Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs762679
MCM4
8 47972876 missense variant T/A snv 0.87 0.88 4
rs3735485
MYO1G
7 44969742 missense variant A/G snv 0.87 0.88 6
rs4645881
BAX
19 48955005 non coding transcript exon variant C/G;T snv 0.83 2
rs7302975
RESF1
12 31985990 intron variant T/C snv 0.81 0.80 1
rs1805419
BAX
19 48955847 intron variant A/G snv 0.67 0.66 1
rs1071849
UBXN11 ; CD52
1 26320235 missense variant A/G snv 0.67 0.70 1
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs1800692
TNFRSF1A
0.925 0.120 12 6333180 missense variant A/G snv 0.64 0.71 1
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 55
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 1
rs440446
APOE
0.807 0.200 19 44905910 missense variant C/G;T snv 0.60 1
rs2856451
TNXB
6 32043581 intron variant A/G;T snv 0.59 3
rs14408
IFITM2
11 308314 missense variant T/C;G snv 0.53 4
rs2227312
TNFRSF14 ; TNFRSF14-AS1
1 2556224 5 prime UTR variant C/A snv 0.51 0.54 1
rs7257
ST20 ; ST20-MTHFS ; MTHFS
15 79899001 missense variant G/A snv 0.51 0.47 1
rs888838
CCDC9
19 47270529 intron variant A/G;T snv 0.51; 1.6E-05 1
rs2075995
E2F2 ; LOC101928163
1 23520972 missense variant C/A snv 0.45 0.39 3
rs228953
IL2RB
22 37135396 synonymous variant G/A snv 0.42 0.43 1
rs1059091
IFITM2
11 309127 missense variant A/C;G;T snv 0.42 1
rs12952581
LOC102724596
0.925 0.080 17 49370984 intron variant G/A snv 0.42 0.28 3
rs887387
ATP2A3
17 3925408 synonymous variant T/C snv 0.35 0.32 1
rs6919266
EFHC1
6 52495747 3 prime UTR variant T/C snv 0.34 0.37 1
rs1420101
IL1RL1 ; IL18R1
0.827 0.280 2 102341256 synonymous variant C/T snv 0.33 0.35 3
rs725660
BHMG1
19 45759028 missense variant C/A snv 0.32 0.33 2