Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 15
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80 7
rs27434
ERAP1
1.000 0.040 5 96793809 synonymous variant A/G;T snv 0.72; 1.2E-05 1
rs3810936
TNFSF15
0.742 0.320 9 114790605 synonymous variant T/C snv 0.71 0.75 1
rs27044
ERAP1 ; LOC102724748
0.827 0.240 5 96783148 missense variant G/C snv 0.69 0.71 1
rs3747517
IFIH1
0.732 0.360 2 162272314 missense variant T/C snv 0.68 0.68 5
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 55
rs469758
LOC102724748 ; ERAP1
0.827 0.120 5 96786011 intron variant C/T snv 0.62 0.63 5
rs30187
ERAP1
0.732 0.360 5 96788627 missense variant T/A;C snv 0.62 1
rs27529
ERAP1
1.000 0.040 5 96790605 missense variant A/G;T snv 0.62 1
rs11574938
ITGAL
0.827 0.120 16 30474072 missense variant G/A;C snv 0.62 6
rs2293152
STAT3
0.763 0.480 17 42329511 intron variant G/A;C;T snv 2.8E-05; 0.59; 1.6E-05 1
rs2234161
TNFRSF14
0.827 0.120 1 2559766 non coding transcript exon variant C/T snv 4.1E-05; 0.55 0.58 5
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 7
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 1
rs4077515
CARD9
0.763 0.360 9 136372044 missense variant C/A;T snv 4.0E-06; 0.41 4
rs602662
LOC105447645 ; FUT2
0.716 0.280 19 48703728 missense variant G/A snv 0.40 0.47 15
rs4833095
TLR1
0.662 0.480 4 38798089 missense variant T/C snv 0.38 0.44 2
rs174535
MYRF ; TMEM258
0.776 0.280 11 61783884 missense variant T/A;C;G snv 0.38 0.32 11
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 1
rs1800693
TNFRSF1A
0.776 0.360 12 6330843 non coding transcript exon variant T/C snv 0.36; 4.0E-06 0.38 3
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 1