Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3592
Gene Symbol: IL12A
IL12A
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.640 Biomarker BEFREE Our data revealed that TLR stimulation of PBC (n = 17) and pSS monocytes (n = 6) resulted in significant induction of IL12A mRNA (p < 0.05, p < 0.01, respectively) compared to PSC monocytes (n = 13) and at similar levels to HC monocytes (n = 8). 30119881

2018

Entrez Id: 3592
Gene Symbol: IL12A
IL12A
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.640 GeneticVariation BEFREE Fine-mapping analysis showed that a five-allele haplotype in the 3' flank of IL12A was significantly associated with primary biliary cirrhosis (P=1.15x10(-34)). 19458352

2009

Entrez Id: 3592
Gene Symbol: IL12A
IL12A
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.640 GeneticVariation BEFREE Here, we performed an association analysis between IL12A, IL12RB, and signal transducer and activator of transcription 4 (STAT4) genetic variations and susceptibility to PBC. 24648611

2014

Entrez Id: 3592
Gene Symbol: IL12A
IL12A
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.640 Biomarker BEFREE In addition, the risk alleles of the 2 SNPs were significantly associated with down-regulation of SCHIP1, a celiac disease susceptible gene, 91.5 kb upstream of IL12A.These results not only demonstrated that IL12A is associated with PBC in the Chinese Han population but also identified a potential mechanism for its involvement in the pathogenesis of PBC. 27175695

2016

Entrez Id: 6689
Gene Symbol: SPIB
SPIB
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.620 GeneticVariation BEFREE We fine mapped two primary biliary cirrhosis (PBC) risk loci, CLEC16A (C-type lectin domain family 16 member A)-suppressor of cytokine signaling 1 (SOCS1) and Spi-B protein (SPIB) and sequenced a locus, sialic acid acetylesterase (SIAE), proposed to harbor autoimmunity-associated mutations. 22257840

2012

Entrez Id: 6689
Gene Symbol: SPIB
SPIB
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.620 Biomarker BEFREE To examine the genetics of susceptibility to primary biliary cirrhosis (PBC), genome-wide association studies GWAS have been performed in patients of European ancestry and have shown the significant associations of IL12-related pathways, SPIB, IRF5-TNPO3, and 17q12-21. 21506939

2011

Entrez Id: 1244
Gene Symbol: ABCC2
ABCC2
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.520 Biomarker BEFREE Double immunofluorescence labeling with a canalicular marker (dipeptidyl peptidase IV) demonstrated proper canalicular localization of BSEP and MRP2 in PBC. 12763363

2003

Entrez Id: 3594
Gene Symbol: IL12RB1
IL12RB1
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.520 Biomarker BEFREE <i>Background</i>.Recent GWAS in primary biliary cholangitis (PBC) showed strong associations with SNPs located within interleukin-12 receptor (IL12R) beta-2 <i>(IL12RB2)</i> gene.<i>Aims</i>. 28299343

2017

Entrez Id: 1244
Gene Symbol: ABCC2
ABCC2
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.520 Biomarker BEFREE We investigated the uptake transporters OATP2 (SLC21A6), OATP8 (SLC21A8), and NTCP (SLC10A1), the export pumps MRP2 (ABCC2), MRP3 (ABCC3), MRP6 (ABCC6), and P-glycoproteins (ABCB1, ABCB4, ABCB11), and radixin, in non-icteric primary biliary cirrhosis (PBC stages I-III) and control human liver needle-biopsies using immunofluorescence microscopy and semi-quantitative RT-PCR. 14568249

2003

Entrez Id: 3594
Gene Symbol: IL12RB1
IL12RB1
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.520 GeneticVariation BEFREE Here, we performed an association analysis between IL12A, IL12RB, and signal transducer and activator of transcription 4 (STAT4) genetic variations and susceptibility to PBC. 24648611

2014

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 Biomarker BEFREE Furthermore, significantly increased TL1A had been detected in liver tissues and mononuclear cells of patients with primary biliary cirrhosis (PBC). 30906791

2019

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 Biomarker BEFREE TNFSF15 and ICOSLG-CXCR5 might constitute a shared pathogenic pathway in the development of PBC and CD in the Japanese population, whereas IL12B-STAT4-NFKB1 might constitute an opposite pathogenic pathway, reflecting the different balance between Th1 and Th17 in the two diseases. 26084578

2015

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 GeneticVariation BEFREE Along with corroborating known PBC-associated loci (TNFSF15, HLA-DRA), risk haplotypes may potentially model cis-interactions that regulate gene expression. 29773854

2018

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 GeneticVariation BEFREE A previous genome-wide association study (GWAS) performed in 963 Japanese individuals (487 primary biliary cholangitis [PBC] cases and 476 healthy controls) identified TNFSF15 (rs4979462) and POU2AF1 (rs4938534) as strong susceptibility loci for PBC. 28062665

2017

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 Biomarker BEFREE This suggests that modulation of TL1A-DR3 interaction may be a potential therapeutic target in several autoimmune diseases, including IBD, RA, AS, and PBC. 24453414

2013

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 AlteredExpression BEFREE In summary, we provide evidence that variance within TNFSF15 has the potential to affect cytokine expression across a range of tissues and thereby contribute to protection from infectious diseases such as leprosy, while increasing the risk of immune-mediated diseases including CD and PBC. 27507062

2016

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 GeneticVariation BEFREE This study identified the causal variant for PBC susceptibility in the TNFSF15 locus and clarified its underlying molecular mechanism. 25899471

2015

Entrez Id: 9966
Gene Symbol: TNFSF15
TNFSF15
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.480 GeneticVariation BEFREE Genome-wide association study identifies TNFSF15 and POU2AF1 as susceptibility loci for primary biliary cirrhosis in the Japanese population. 23000144

2012

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 Biomarker BEFREE Immunogenetic studies have identified polymorphisms of the IL-12/STAT4 pathway as being associated with PBC. 31803181

2019

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 GeneticVariation BEFREE The effect of ICOSLG and CXCR5 variants were concordant but the effect of STAT4, NFKB1 and IL12B variants were discordant for PBC and CD. 26084578

2015

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 PosttranslationalModification BEFREE This effect was mediated by the rapid and strong phosphorylation of STAT4 on Treg cells from patients with PBC and pSS (p < 0.05) but not PSC and HC. 30119881

2018

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 Biomarker BEFREE Potential functional implications of key findings are discussed including the IL-12/STAT4 pathway in PBC and the CD28/IL-2 pathway in PSC. 26347073

2016

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 GeneticVariation BEFREE STAT4 gene polymorphism has been shown to be associated with the antiviral response in chronic hepatitis C and drug-induced liver injury (DILI), primary biliary cirrhosis (PBC), HCV-associated liver fibrosis and in hepatocellular carcinoma (HCC). 25798064

2015

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 GeneticVariation BEFREE Among 21 non-HLA susceptibility loci for PBC identified in GWASs of individuals of European descent, three loci (IL7R, IKZF3, and CD80) showed significant associations (combined p = 3.66 × 10(-8), 3.66 × 10(-9), and 3.04 × 10(-9), respectively) and STAT4 and NFKB1 loci showed suggestive association with PBC (combined p = 1.11 × 10(-6) and 1.42 × 10(-7), respectively) in the Japanese population. 23000144

2012

Entrez Id: 6775
Gene Symbol: STAT4
STAT4
CUI: C0008312
Disease: Primary biliary cirrhosis
Primary biliary cirrhosis
0.470 Biomarker BEFREE Our findings confirm that STAT4 is involved in PBC susceptibility and may play a role in ANA status in the Japanese population. 24648611

2014