Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs34637584
rs34637584
LRRK2
0.583 0.480 12 40340400 missense variant G/A snv 5.3E-04 3.6E-04
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.900 0.996 2 2005 2020
dbSNP: rs34778348
rs34778348
LRRK2 ; LOC105369736
0.742 0.120 12 40363526 missense variant G/A snv 1.7E-03 5.8E-04
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.900 0.925 1 2006 2019
dbSNP: rs11868035
rs11868035
SREBF1 ; RAI1
0.763 0.200 17 17811787 splice region variant G/A snv 0.45 0.33
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.840 0.500 1 2011 2019
dbSNP: rs356219
rs356219
SNCA ; LOC105377329
0.776 0.240 4 89716450 intron variant G/A snv 0.54
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.900 1.000 4 2008 2019
dbSNP: rs12413409
rs12413409
CNNM2
0.790 0.200 10 102959339 intron variant G/A snv 9.0E-02
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 1 2009 2009
dbSNP: rs3129882
rs3129882
HLA-DRA
0.807 0.240 6 32441753 intron variant G/A snv 0.56
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.900 0.818 2 2010 2015
dbSNP: rs1052553
rs1052553
MAPT
0.827 0.200 17 45996523 synonymous variant A/G snv 0.14 0.15
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.730 0.750 1 2010 2012
dbSNP: rs8070723
rs8070723
MAPT
0.851 0.240 17 46003698 intron variant A/G snv 0.18
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.800 1.000 5 2009 2014
dbSNP: rs11931074
rs11931074
SNCA ; LOC105377329
0.851 0.080 4 89718364 intron variant G/A;C;T snv
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.900 1.000 4 2009 2020
dbSNP: rs12185268
rs12185268
SPPL2C ; MAPT-AS1
0.851 0.160 17 45846317 missense variant A/G snv 0.15 0.14
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.810 1.000 3 2011 2019
dbSNP: rs393152
rs393152
LINC02210 ; LINC02210-CRHR1
0.851 0.160 17 45641777 non coding transcript exon variant A/G snv 0.18 0.29
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.810 1.000 3 2009 2015
dbSNP: rs1876828
rs1876828
CRHR1 ; MAPT-AS1 ; LINC02210-CRHR1
0.851 0.160 17 45834159 intron variant C/T snv 0.14
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 2 2011 2012
dbSNP: rs12373142
rs12373142
SPPL2C ; MAPT-AS1
0.851 0.200 17 45846834 missense variant C/G;T snv 0.15
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 1 2012 2012
dbSNP: rs2736990
rs2736990
SNCA
0.882 0.080 4 89757390 intron variant G/A;T snv
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.860 1.000 6 2009 2018
dbSNP: rs183211
rs183211
NSF ; LRRC37A2
0.882 0.160 17 46710944 intron variant G/A snv 0.28 0.30
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.800 1.000 4 2009 2012
dbSNP: rs17690703
rs17690703
MAPT-AS1
0.882 0.160 17 45847931 intron variant C/T snv 0.18
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 3 2009 2012
dbSNP: rs7224296
rs7224296
NSF ; LRRC37A2
0.882 0.160 17 46722680 intron variant G/A snv 0.59
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 3 2009 2012
dbSNP: rs894278
rs894278
SNCA
0.882 0.080 4 89813384 intron variant T/G snv 0.15
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.720 1.000 3 2009 2019
dbSNP: rs356165
rs356165
SNCA
0.882 0.080 4 89725735 3 prime UTR variant G/A snv 0.54
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.780 0.900 2 2007 2015
dbSNP: rs6812193
rs6812193
FAM47E ; FAM47E-STBD1 ; LOC105377286
0.882 0.080 4 76277833 intron variant C/T snv 0.38
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.880 0.667 2 2009 2017
dbSNP: rs11724804
rs11724804
DGKQ
0.882 0.160 4 971991 intron variant G/A snv 0.43
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 1 2011 2011
dbSNP: rs12185233
rs12185233
SPPL2C ; MAPT-AS1
0.882 0.160 17 45846288 missense variant G/A;C snv 9.5E-05; 0.15
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 1 2012 2012
dbSNP: rs12373123
rs12373123
SPPL2C ; MAPT-AS1
0.882 0.160 17 45846707 missense variant T/C snv 0.15 0.14
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 1 2012 2012
dbSNP: rs12411886
rs12411886
CNNM2
0.882 0.080 10 102925542 intron variant C/A snv 7.8E-02
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.700 1.000 1 2009 2009
dbSNP: rs12456492
rs12456492
RIT2
0.882 0.080 18 43093415 intron variant A/G snv 0.33
CUI: C0030567
Disease: Parkinson Disease
Parkinson Disease 		0.890 0.909 1 2012 2020