Source: ALL

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1047100
rs1047100
CUI: C1704272
Disease: Benign Prostatic Hyperplasia
Benign Prostatic Hyperplasia
0.010 GeneticVariation BEFREE However, analysis according to clinical phenotypes showed that rs1047100 of FGFR2 was associated with prostate volume in BPH in the dominant model (GA/AA versus GG, P = 0.010). 24385678

2013

dbSNP: rs1057519038
rs1057519038
CUI: C0039144
Disease: Syringomyelia
Syringomyelia
0.010 GeneticVariation BEFREE A novel FGFR2 mutation, Tyr281Cys, was found in familial Crouzon syndrome with Chiari I and syringomyelia. 12186468

2002

dbSNP: rs1057519038
rs1057519038
CUI: C0010273
Disease: Craniofacial Dysostosis
Craniofacial Dysostosis
0.010 GeneticVariation BEFREE Two types of missense mutations were detected in the FGFR2 gene, Cys342Trp (1205, TGC --> TGG) in a patient with sporadic Crouzon syndrome and Tyr281Cys (1021, TAC --> TGC) in two siblings (brother and sister) with familial Crouzon syndrome, respectively. 12186468

2002

dbSNP: rs1057519043
rs1057519043
CUI: C0010273
Disease: Craniofacial Dysostosis
Craniofacial Dysostosis
0.010 GeneticVariation BEFREE Our study further identified G338R FGFR2 mutation (c1012G > C) lead to inherited Crouzon syndrome. 29848297

2018

dbSNP: rs1057519854
rs1057519854
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.010 GeneticVariation BEFREE The two most common somatic mutations identified were S252W (in eight tumors) and N550K (in five samples). 17525745

2007

dbSNP: rs1057520029
rs1057520029
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.010 GeneticVariation BEFREE We identified one somatic heterozygous missense mutation, p.K660N (c.1980G>C), within the tyrosine kinase domain of FGFR2 in tumor tissue of a sporadic breast cancer patient, which is likely mediated by the FGFR2-IIIb isoform. 23527311

2013

dbSNP: rs1057520029
rs1057520029
CUI: C4016282
Disease: BREAST CANCER, SOMATIC
BREAST CANCER, SOMATIC
0.010 GeneticVariation BEFREE We have analyzed the tyrosine kinase activity of p.K660N and another recently described somatic breast cancer mutation in FGFR2, p.R203C, after expression in HEK293 cells and demonstrated that the intrinsic tyrosine kinase activity of both mutant proteins is strongly increased resulting in elevated phosphorylation and activity of downstream effectors. 23527311

2013

dbSNP: rs1057520029
rs1057520029
CUI: C0410529
Disease: Hypochondroplasia (disorder)
Hypochondroplasia (disorder)
0.010 GeneticVariation BEFREE Individuals with hypochondroplasia heterozygous for the Asn540Lys substitution are significantly more disproportionate than individuals without this mutation. 11071087

2000

dbSNP: rs10736303
rs10736303
CUI: C0024636
Disease: Malocclusion
Malocclusion
0.010 GeneticVariation BEFREE Five SNPs (rs2162540, rs2981578, rs1078806, rs11200014, and rs10736303) were found to be associated with skeletal malocclusions (all <i>P</i> < 0.05). 31509720

2019

dbSNP: rs10736303
rs10736303
CUI: C0678222
Disease: Breast Carcinoma
Breast Carcinoma
0.010 GeneticVariation BEFREE In the validation study using Stage I of the 2,273 cases and 2,052 controls, seven GWAS-identified loci [5q11.2/MAP3K1 (rs889312 and rs16886165), 5p15.2/ROPN1L (rs1092913), 5q12/MRPS30 (rs7716600), 6q25.1/ESR1 (rs2046210 and rs3734802), 8q24.21 (rs1562430), 10q26.13/FGFR2 (rs10736303), and 16q12.1/TOX3 (rs4784227 and rs3803662)] were significantly associated with breast cancer risk in Korean women (Ptrend < 0.05). 22452962

2012

dbSNP: rs1078806
rs1078806
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE We obtained a significant allele P value of association with AJ breast cancer in the FGFR2 region (P = 1.5 x 10(-5), odds ratio (OR) 1.26, 95% confidence interval (CI) 1.13-1.40 at rs1078806 for all phases combined). 18326623

2008

dbSNP: rs1078806
rs1078806
CUI: C0678222
Disease: Breast Carcinoma
Breast Carcinoma
0.010 GeneticVariation BEFREE We obtained a significant allele P value of association with AJ breast cancer in the FGFR2 region (P = 1.5 x 10(-5), odds ratio (OR) 1.26, 95% confidence interval (CI) 1.13-1.40 at rs1078806 for all phases combined). 18326623

2008

dbSNP: rs11199993
rs11199993
CUI: C0006012
Disease: Borderline Personality Disorder
Borderline Personality Disorder
0.010 GeneticVariation BEFREE After correcting the multiple tests by permutation, one SNP (rs11199993), and a haplotype including this SNP, was found to be significantly associated with BPD. 22404656

2012

dbSNP: rs11199993
rs11199993
CUI: C0006287
Disease: Bronchopulmonary Dysplasia
Bronchopulmonary Dysplasia
0.010 GeneticVariation BEFREE After correcting the multiple tests by permutation, one SNP (rs11199993), and a haplotype including this SNP, was found to be significantly associated with BPD. 22404656

2012

dbSNP: rs11200014
rs11200014
CUI: C0346153
Disease: Breast Cancer, Familial
Breast Cancer, Familial
0.010 GeneticVariation BEFREE The data showed that the homozygotes at each minor allele, rs11200014 (AA), rs1219648 (GG), rs2420946 (TT), and rs2981582 (TT), were significantly associated with an increased risk of early-onset non-familial breast cancer. 22374580

2012

dbSNP: rs1201848305
rs1201848305
CUI: C0266548
Disease: Axenfeld anomaly (disorder)
Axenfeld anomaly (disorder)
0.010 GeneticVariation BEFREE A child with a different FGFR2 mutation (p.Ala344Ala, c1032 G --> A heterozygote), premature fusion of the sagittal suture, and an Axenfeld-Rieger anomaly but otherwise normal clinical course is reported. 16158432

2005

dbSNP: rs121913474
rs121913474
CUI: C1513734
Disease: Solid/Multicystic Ameloblastoma
Solid/Multicystic Ameloblastoma
0.010 GeneticVariation BEFREE Among the BRAF wild-type cases, 1 UAM showed a missense SMO mutation (p.L412F), whereas 2 NRAS (p.Q61R), 2 HRAS (p.Q61R), and 2 FGFR2 (p.C383R) activating mutations were identified in AM. 30216733

2019

dbSNP: rs121913474
rs121913474
CUI: C0029408
Disease: Degenerative polyarthritis
Degenerative polyarthritis
0.010 GeneticVariation BEFREE Extremely severe scoliosis, heterotopic ossification, and osteoarthritis in a three-generation family with Crouzon syndrome carrying a mutant c.799T>C FGFR2. 31318164

2019

dbSNP: rs121913474
rs121913474
CUI: C2931196
Disease: Craniofacial dysostosis type 1
Craniofacial dysostosis type 1
0.010 GeneticVariation BEFREE Extremely severe scoliosis, heterotopic ossification, and osteoarthritis in a three-generation family with Crouzon syndrome carrying a mutant c.799T>C FGFR2. 31318164

2019

dbSNP: rs121913474
rs121913474
CUI: C0010273
Disease: Craniofacial Dysostosis
Craniofacial Dysostosis
0.010 GeneticVariation BEFREE Extremely severe scoliosis, heterotopic ossification, and osteoarthritis in a three-generation family with Crouzon syndrome carrying a mutant c.799T>C FGFR2. 31318164

2019

dbSNP: rs121913474
rs121913474
CUI: C0006826
Disease: Malignant Neoplasms
Malignant Neoplasms
0.010 GeneticVariation BEFREE FGFR2 p.Cys382Arg is a known somatic driver mutation in human cancer, previously reported to result in activation of RAS signalling. 27095246

2017

dbSNP: rs121913474
rs121913474
CUI: C1306459
Disease: Primary malignant neoplasm
Primary malignant neoplasm
0.010 GeneticVariation BEFREE FGFR2 p.Cys382Arg is a known somatic driver mutation in human cancer, previously reported to result in activation of RAS signalling. 27095246

2017

dbSNP: rs121913476
rs121913476
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.010 GeneticVariation BEFREE The two most common somatic mutations identified were S252W (in eight tumors) and N550K (in five samples). 17525745

2007

dbSNP: rs121913478
rs121913478
CUI: C0026764
Disease: Multiple Myeloma
Multiple Myeloma
0.010 GeneticVariation BEFREE PRO-001 did not inhibit constitutive activation of K650E, G384D, and Y373C FGFR3 in myeloma cell lines and failed to inhibit the growth of these cells. 16467200

2006

dbSNP: rs121913478
rs121913478
CUI: C1300256
Disease: Thanatophoric dysplasia, type 1
Thanatophoric dysplasia, type 1
0.010 GeneticVariation BEFREE We report on a case of thanatophoric dysplasia type 1 (TD1) due to a Tyr373Cys mutation in the fibroblast growth factor receptor 3 (FGFR3) gene with soft tissue syndactyly of the fingers and toes. 9843049

1998