Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs121913377
rs121913377
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE <b>Objective:</b> The COMBI-AD trial demonstrated the efficacy and safety of dabrafenib and trametinib in combination vs placebo as adjuvant treatment of patients with BRAF V600E/K mutation-positive resected Stage IIIA (lymph node metastasis >1 mm), IIIB, or IIIC melanoma. 31223037

2019

dbSNP: rs113488022
rs113488022
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE <b>Objective:</b> The COMBI-AD trial demonstrated the efficacy and safety of dabrafenib and trametinib in combination vs placebo as adjuvant treatment of patients with BRAF V600E/K mutation-positive resected Stage IIIA (lymph node metastasis >1 mm), IIIB, or IIIC melanoma. 31223037

2019

dbSNP: rs121913377
rs121913377
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE Lymph node metastasis and BRAF V600E mutations were more frequent in papillary thyroid cancers with high LOC100507661 expression. 27151833

2016

dbSNP: rs113488022
rs113488022
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE Lymph node metastasis and BRAF V600E mutations were more frequent in papillary thyroid cancers with high LOC100507661 expression. 27151833

2016

dbSNP: rs1800872
rs1800872
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE A promoter variant (rs1800872) in the Interleukin-10 (IL-10) gene was associated with an increased lymph node metastasis involvement [odds ratio (OR) = 2.1, 95% confidence interval (CI) = 1.03-4.2, for carriers of the TT genotype]. 21239167

2011

dbSNP: rs531564
rs531564
Secondary malignant neoplasm of lymph node
0.020 GeneticVariation BEFREE Additionally, pri-miR-124 rs531564 polymorphism was significantly associated with the decreased risk of poor differentiation and lymph node metastasis of CRC. 26423518

2015

dbSNP: rs10754339
rs10754339
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE Additionally, the rs10754339 GG genotype was significantly associated with lymph node metastasis and PR status, and the G allele and the AG genotype were respectively associated with lymph node metastasis and ER status. 19903360

2009

dbSNP: rs121913377
rs121913377
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE Additionally, there were significant associations (P<0.05) between BRAF(V600E) and a higher tumor-node-metastasis staging (III/IV), and between miR-21* over-expression and lymph node metastasis. 23416953

2013

dbSNP: rs113488022
rs113488022
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE Additionally, there were significant associations (P<0.05) between BRAF(V600E) and a higher tumor-node-metastasis staging (III/IV), and between miR-21* over-expression and lymph node metastasis. 23416953

2013

dbSNP: rs10877887
rs10877887
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE adjusted OR = 0.50, 95% CI = 0.33-0.77, P = 0.001, respectively).Our study suggests that the rs10877887 polymorphism may be associated with the risk of PTC and the rs13293512 polymorphism may correlate to lymph node metastasis in PTC. 26512603

2015

dbSNP: rs13293512
rs13293512
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE adjusted OR = 0.50, 95% CI = 0.33-0.77, P = 0.001, respectively).Our study suggests that the rs10877887 polymorphism may be associated with the risk of PTC and the rs13293512 polymorphism may correlate to lymph node metastasis in PTC. 26512603

2015

dbSNP: rs121434569
rs121434569
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE After her death, an autopsy revealed SCLC transformation and EGFR T790M secondary mutation (T790M) as mutually exclusive resistance mechanisms occurring differently in different metastases; two liver metastases (SCLC versus AC with T790M) and two lymph node metastases (SCLC versus AC with T790M) were analyzed to compare the expression status of immune markers by immunohistochemistry and by an immune oncology gene expression panel. 28193529

2017

dbSNP: rs1478604
rs1478604
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE After logistic regression and stratification analysis, rs1478604 A>G was more strongly associated with lymph node metastasis in HDC gastric cancer. 22011138

2012

dbSNP: rs12774070
rs12774070
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE Among 141 HCC patients with smoking behaviour, we found significant associations of the rs12774070 (CC+AA vs CC) and rs61573157 (CT+TT vs CC) variants with a clinical stage of HCC (OR: 2.500 and 2.767; 95% CI: 1.148-5.446 and 1.096-6.483; P = 0.019 and 0.026, respectively) and tumour size (OR: 2.387 and 2.659; 95% CI: 1.098-5.188 and 1.055-6.704; P = 0.026 and 0.034, respectively), but not with lymph node metastasis or other clinical statuses. 28231306

2017

dbSNP: rs61573157
rs61573157
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE Among 141 HCC patients with smoking behaviour, we found significant associations of the rs12774070 (CC+AA vs CC) and rs61573157 (CT+TT vs CC) variants with a clinical stage of HCC (OR: 2.500 and 2.767; 95% CI: 1.148-5.446 and 1.096-6.483; P = 0.019 and 0.026, respectively) and tumour size (OR: 2.387 and 2.659; 95% CI: 1.098-5.188 and 1.055-6.704; P = 0.026 and 0.034, respectively), but not with lymph node metastasis or other clinical statuses. 28231306

2017

dbSNP: rs895819
rs895819
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE Among the patients, rs895819 G variants were moderately associated with lymphatic invasion and lymph node metastasis, while rs11671784 A variants were associated with significantly reduced risk of lymphatic invasion. qRT-PCR results demonstrated rs895819 polymorphism contributed to an aberrant process from pri-miR-27a to pre-miR-27a, but rs11671784 did not affect the transcription and post-transcription processes of the miR-27a gene. 25399405

2014

dbSNP: rs11671784
rs11671784
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE Among the patients, rs895819 G variants were moderately associated with lymphatic invasion and lymph node metastasis, while rs11671784 A variants were associated with significantly reduced risk of lymphatic invasion. qRT-PCR results demonstrated rs895819 polymorphism contributed to an aberrant process from pri-miR-27a to pre-miR-27a, but rs11671784 did not affect the transcription and post-transcription processes of the miR-27a gene. 25399405

2014

dbSNP: rs74799832
rs74799832
RET
Secondary malignant neoplasm of lymph node
0.020 GeneticVariation BEFREE An activating M918T RET (c.2753T>C) somatic mutation was identified in a lymph node metastasis. 28068878

2017

dbSNP: rs438034
rs438034
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE As a main observation, carriers of the A allele of the CENPF SNP rs438034 had a worse BC-specific survival compared to the wild type genotype GG carriers (hazard ratio (HR) 2.65, 95% confidence interval (CI) 1.19-5.90), although they were less likely to have regional lymph node metastases (odds ratio (OR) 0.71, 95% CI 0.51-1.01) and tumours of stage II-IV (OR 0.73, 95% CI 0.54-0.99). 19008095

2009

dbSNP: rs75873440
rs75873440
RET
Secondary malignant neoplasm of lymph node
0.020 GeneticVariation BEFREE Association between a SNP or haplotype and age at diagnosis or presence of lymph node metastasis was tested in 34 G533C-carries with MTC. 19138318

2009

dbSNP: rs121913377
rs121913377
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE Association of BRAF V600E Mutation and MicroRNA Expression with Central Lymph Node Metastases in Papillary Thyroid Cancer: A Prospective Study from Four Endocrine Surgery Centers. 26950846

2016

dbSNP: rs113488022
rs113488022
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE Association of BRAF V600E Mutation and MicroRNA Expression with Central Lymph Node Metastases in Papillary Thyroid Cancer: A Prospective Study from Four Endocrine Surgery Centers. 26950846

2016

dbSNP: rs11886868
rs11886868
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE BCL11A rs11886868 and rs4671393 genotype variations and correspondingly high BCL11A plasma levels are related to LSCC, besides, differences in plasma levels and genotype distribution may be related to lymph node metastasis status and the stage of LSCC. 28225775

2017

dbSNP: rs4671393
rs4671393
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE BCL11A rs11886868 and rs4671393 genotype variations and correspondingly high BCL11A plasma levels are related to LSCC, besides, differences in plasma levels and genotype distribution may be related to lymph node metastasis status and the stage of LSCC. 28225775

2017

dbSNP: rs121913377
rs121913377
Secondary malignant neoplasm of lymph node
0.100 GeneticVariation BEFREE BRAF V600E mutation and p27 kip1 expression in papillary carcinomas of the thyroid <or=1 cm and their paired lymph node metastases. 17685465

2007