Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 145282
Gene Symbol: MIPOL1
MIPOL1
0.010 Biomarker group BEFREE Mirror Image Polydactyly 1 (MIPOL1) is generally associated with congenital anomalies. 31609475 2020
Entrez Id: 84172
Gene Symbol: POLR1B
POLR1B
0.010 Biomarker group BEFREE Pathogenic variants in the RNA polymerase I subunit POLR1B might induce massive p53-dependent apoptosis in a restricted neuroepithelium area, altering NCC migration and causing cranioskeletal malformations. 31649276 2020
Entrez Id: 3166
Gene Symbol: HMX1
HMX1
0.010 GeneticVariation group BEFREE The strongest significant SNP was identified on OAR6, approximating the evolutionarily conserved region of the HMX1 gene, which is related to congenital malformations of the external ear in other species such as cattle and rats. 31691317 2020
Entrez Id: 3692
Gene Symbol: EIF6
EIF6
0.010 Biomarker group BEFREE The prevalence of tumor growth, miscarriage, preterm, low birth weight, congenital malformations and impairment in neuropsychological development in children among women treated with CAB were assessed in a Brazilian multicentre retrospective observational study, RESULTS: We included 194 women with a mean age of 31 (17-45) years, 43.6% presenting microadenomas and 56.4% macroadenomas, at prolactinoma diagnosis. 31728906 2020
Entrez Id: 57492
Gene Symbol: ARID1B
ARID1B
0.010 GeneticVariation group BEFREE ARID1B gene mutations have been associated with two hereditary syndromic conditions, namely Coffin-Siris (CSS, MIM#135900) and Nicolaides-Baraitser syndromes (NCBRS, MIM#601358), characterized by neurodevelopment delay, craniofacial dysmorphisms and skeletal anomalies. 31421289 2020
Entrez Id: 56654
Gene Symbol: NPDC1
NPDC1
0.010 Biomarker group BEFREE The prevalence of tumor growth, miscarriage, preterm, low birth weight, congenital malformations and impairment in neuropsychological development in children among women treated with CAB were assessed in a Brazilian multicentre retrospective observational study, RESULTS: We included 194 women with a mean age of 31 (17-45) years, 43.6% presenting microadenomas and 56.4% macroadenomas, at prolactinoma diagnosis. 31728906 2020
Entrez Id: 57178
Gene Symbol: ZMIZ1
ZMIZ1
0.010 Biomarker group BEFREE ZMIZ1, zinc finger MIZ-domain containing 1, has recently been described in association with syndromic intellectual disability in which the primary phenotypic features include intellectual disability/developmental delay, seizures, hearing loss, behavioral issues, failure to thrive, and various congenital malformations. 31833199 2020
Entrez Id: 3982
Gene Symbol: LIM2
LIM2
0.010 AlteredExpression group BEFREE High levels of MPs (20 and 200 μg/L) decreased the hatchability, delayed the hatching time, and suppressed the growth, whereas Phe inhibited hatching and caused malformations in larvae. 31759759 2020
Entrez Id: 759
Gene Symbol: CA1
CA1
0.010 Biomarker group BEFREE The prevalence of tumor growth, miscarriage, preterm, low birth weight, congenital malformations and impairment in neuropsychological development in children among women treated with CAB were assessed in a Brazilian multicentre retrospective observational study, RESULTS: We included 194 women with a mean age of 31 (17-45) years, 43.6% presenting microadenomas and 56.4% macroadenomas, at prolactinoma diagnosis. 31728906 2020
Entrez Id: 4360
Gene Symbol: MRC1
MRC1
0.010 GeneticVariation group BEFREE These results suggest that BRCA and MMR genes play an important role in human embryogenesis and that if their function is lowered because of heterozygote mutations, congenital malformations are either more likely (BRCA1 mutations) and/or more susceptible to concern several anatomical systems. 30785647 2020
Entrez Id: 3423
Gene Symbol: IDS
IDS
0.010 Biomarker group BEFREE Among 32-36 week births, all minority groups had higher risk of death from congenital anomalies than White British, the highest rate ratios being 4.50 (3.78 to 5.37) for Pakistani, 2.89 (2.10 to 3.97) for Bangladeshi and 2.06 (1.59 to 2.68) for Black African; risks of death from congenital anomalies and combined rarer causes (infection, intrapartum conditions, SIDS and unclassified) increased with deprivation, the rate ratios comparing the most with the least deprived quintile being, respectively, 1.54 (1.22 to 1.93) and 2.05 (1.55 to 2.72). 31123058 2020
Entrez Id: 2731
Gene Symbol: GLDC
GLDC
0.010 Biomarker group BEFREE Here, we showed that ventriculomegaly in Gldc-deficient mice is preceded by stenosis of the Sylvian aqueduct and malformation or absence of the sub-commissural organ and pineal gland. 31794432 2020
Entrez Id: 5139
Gene Symbol: PDE3A
PDE3A
0.010 GeneticVariation group BEFREE Our study not only adds to the spectrum of PDE3A mutations in the Chinese population and extends the phenotype of HTNB patients to include vertebral malformation but also improves the awareness of pathogenesis in HTNB patients. 31549136 2020
Entrez Id: 9922
Gene Symbol: IQSEC1
IQSEC1
0.010 GeneticVariation group BEFREE The phenotypic similarity of the affecteds and the functional experiments in flies and mice indicate that IQSEC1 variants are the cause of a recessive disease with intellectual disability, developmental delay, and short stature, and that axonal guidance and dendritic projection defects as well as dendritic spine dysgenesis may underlie disease pathogenesis. 31607425 2019
Entrez Id: 470
Gene Symbol: ATHS
ATHS
0.010 Biomarker group BEFREE After microinjection of miR-181a-5p mimic and inhibitor, zebrafish malformation type and percentage were prominently increased such as distorted SIV vessels along with reduced venation and abnormal branches by ALP staining. 30784759 2019
Entrez Id: 3635
Gene Symbol: INPP5D
INPP5D
0.010 Biomarker group BEFREE Treatment of wild-type BM culture with 3 α-aminocholestane (3AC), a specific inhibitor for functional activity of SHIP1, caused a similar developmental defect in BMDCs as seen in SHIP1-KO cells, resulting in the absence of BMDC colony, and increased number of BMMs in BM culture. 30277839 2019
Entrez Id: 51741
Gene Symbol: WWOX
WWOX
0.010 GeneticVariation group BEFREE Novel WWOX deleterious variants cause early infantile epileptic encephalopathy, severe developmental delay and dysmorphism among Yemenite Jews. 30853297 2019
Entrez Id: 22862
Gene Symbol: FNDC3A
FNDC3A
0.010 GeneticVariation group BEFREE We established a hypomorphic fndc3a mutant line (fndc3a<sup>wue1/wue1</sup>) via CRISPR/Cas9, exhibiting phenotypic malformations and changed gene expression patterns during early stages of median fin fold development. 31527654 2019
Entrez Id: 7283
Gene Symbol: TUBG1
TUBG1
0.010 GeneticVariation group BEFREE TUBG1 missense variants underlying cortical malformations disrupt neuronal locomotion and microtubule dynamics but not neurogenesis. 31086189 2019
Entrez Id: 7273
Gene Symbol: TTN
TTN
0.010 GeneticVariation group BEFREE Our results suggest that TTN mutations affecting the Ig domain of the proximal I-band may be a cause of severe congenital defect in skeletal muscles without severe cardiac involvement, thereby providing evidence for the hypothesis that congenital titinopathy patients carrying biallelic N2BA only mutations are at lower cardiac risk than those with other combinations of mutations. 31053406 2019
Entrez Id: 80204
Gene Symbol: FBXO11
FBXO11
0.010 GeneticVariation group BEFREE De novo variants in FBXO11 cause a syndromic form of intellectual disability with behavioral problems and dysmorphisms. 30679813 2019
Entrez Id: 23384
Gene Symbol: SPECC1L
SPECC1L
0.010 GeneticVariation group BEFREE Although the phenotype of individuals with SPECC1L mutations shows overlap with Opitz syndrome in its craniofacial anomalies, the canonical laryngeal malformations and male genital anomalies are not observed. 30472488 2019
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.010 GeneticVariation group BEFREE UNC80 gene mutations have also been shown to cause global developmental delays, failure to thrive, and phenotypic dysmorphisms. 31223553 2019
Entrez Id: 25923
Gene Symbol: ATL3
ATL3
0.010 GeneticVariation group BEFREE ATL3 Y192C delays ER-export by reducing the number of ER exit sites, reduces autophagy, fragments the Golgi and causes malformation of the nucleus. 30666337 2019
Entrez Id: 10914
Gene Symbol: PAPOLA
PAPOLA
0.010 Biomarker group BEFREE Herein we describe the epidemiological characteristics of I-PAP in 697 newborns, 383 males and 314 females identified in 1,178,993 examined live births from a multicenter case-control hospital-based population study, the Mexican program of Registry and Epidemiological Surveillance of Congenital Malformations (RYVEMCE). 31091006 2019