Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9790
Gene Symbol: BMS1
BMS1
0.010 Biomarker disease BEFREE Agenesis and hypoplasia of the corpus callosum (ACC and HCC) are heterogeneous group with a large variation in published prevalence based on few population based studies. 29902589 2018
Entrez Id: 31
Gene Symbol: ACACA
ACACA
0.010 Biomarker disease BEFREE Agenesis and hypoplasia of the corpus callosum (ACC and HCC) are heterogeneous group with a large variation in published prevalence based on few population based studies. 29902589 2018
Entrez Id: 55695
Gene Symbol: NSUN5
NSUN5
0.010 Biomarker disease BEFREE Agenesis and Hypomyelination of Corpus Callosum in Mice Lacking Nsun5, an RNA Methyltransferase. 31174389 2019
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.100 GeneticVariation disease BEFREE MSX1 mutations have been reported in four unrelated families with autosomal dominant tooth agenesis. 15264286 2004
Entrez Id: 860
Gene Symbol: RUNX2
RUNX2
0.030 Biomarker disease BEFREE RUNX2 regulates osteoblast differentiation and chondrocyte maturation and its haploinsufficiency leads to cleidocranial dysplasia, characterized large fontanelles, hypoplasia or aplasia of the clavicles, hypoplasia of the distal phalanges, and a wide pubic symphysis. 15566413 2004
Entrez Id: 1592
Gene Symbol: CYP26A1
CYP26A1
0.010 Biomarker disease BEFREE Cyp26a1-null animals exhibit caudal agenesis and spina bifida, imperforate anus, agenesis of the caudal portions of the digestive and urogenital tracts, and malformed lumbosacral skeletal elements. 16463413 2006
Entrez Id: 10370
Gene Symbol: CITED2
CITED2
0.030 GeneticVariation disease BEFREE CITED2 gene deletion in mice leads to adrenal agenesis. 17283246 2007
Entrez Id: 2301
Gene Symbol: FOXE3
FOXE3
0.010 GeneticVariation disease BEFREE FOXE3 mutations, associated with lens agenesis, have been observed in a few microphthalmic patients. 18039390 2007
Entrez Id: 60675
Gene Symbol: PROK2
PROK2
0.010 Biomarker disease BEFREE Prok2 and prokr2 gene knockout mice both have agenesis or hypoplasia of the olfactory bulbs, associated with hypogonadotropic hypogonadism linked to abnormal GnRH neuron migration. 20389090 2010
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.100 GeneticVariation disease BEFREE MSX1 rs1095 derived allele occurred in individuals with agenesis only, and two other mutations in this gene had been earlier associated with tooth agenesis. 21111400 2011
Entrez Id: 64093
Gene Symbol: SMOC1
SMOC1
0.010 Biomarker disease BEFREE Smoc1 null mice recapitulated MLA phenotypes, including aplasia or hypoplasia of optic nerves, hypoplastic fibula and bowed tibia, and syndactyly in limbs. 21194678 2011
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
0.100 GeneticVariation disease BEFREE GATA6 mutations cause a broad phenotypic spectrum of diabetes from pancreatic agenesis to adult-onset diabetes without exocrine insufficiency. 23223019 2013
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.100 GeneticVariation disease BEFREE PAX9 mutation p.Phe15Ile within the N-terminal β-hairpin structure of the PAX9 paired domain causes tooth agenesis. 23227268 2012
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.100 AlteredExpression disease BEFREE MSX1 and PAX9 investigation in monozygotic twins with variable expression of tooth agenesis. 24103583 2013
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.100 GeneticVariation disease BEFREE PAX9 polymorphisms and susceptibility with sporadic tooth agenesis in Turkish populations: a case-control study. 24160254 2013
Entrez Id: 80326
Gene Symbol: WNT10A
WNT10A
0.100 Biomarker disease BEFREE OODD is a rare form of autosomal recessive ectodermal dysplasia involving hair, teeth, nails, and skin, characterized by hypodontia (tooth agenesis), smooth tongue with marked reduction of filiform and fungiform papillae, nail dysplasia, dry skin, palmoplantar keratoderma, and hyperhidrosis of palms and soles. 24458874 2014
Entrez Id: 6935
Gene Symbol: ZEB1
ZEB1
0.010 Biomarker disease BEFREE Posterior polymorphous corneal dystrophy 3 is associated with agenesis and hypoplasia of the corpus callosum. 24780443 2014
Entrez Id: 6495
Gene Symbol: SIX1
SIX1
0.010 Biomarker disease BEFREE Six1 deficient mice exhibit uni- or bilateral renal hypoplasia or kidney agenesis. 24899122 2014
Entrez Id: 80326
Gene Symbol: WNT10A
WNT10A
0.100 GeneticVariation disease BEFREE WNT10A coding variants and maxillary lateral incisor agenesis with associated dental anomalies. 25545742 2015
Entrez Id: 7471
Gene Symbol: WNT1
WNT1
0.010 GeneticVariation disease BEFREE Wnt1-Cre;Ift88fl/flpups died at birth due to severe craniofacial defects including bilateral cleft lip and palate and tongue agenesis, following the loss of the primary cilia in the CNC-derived palatal mesenchyme. 28069795 2017
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.100 GeneticVariation disease BEFREE PAX9 gene mutations and tooth agenesis: A review. 28155232 2017
Entrez Id: 64388
Gene Symbol: GREM2
GREM2
0.030 GeneticVariation disease BEFREE GREM2 nucleotide variants and the risk of tooth agenesis. 28992378 2018
Entrez Id: 80326
Gene Symbol: WNT10A
WNT10A
0.100 Biomarker disease BEFREE WNT10A has previously been associated with both syndromic and non-syndromic forms of tooth agenesis, and this report further expands our knowledge of genetic variation underlying non-syndromic forms of this condition. 29927056 2018
Entrez Id: 126695
Gene Symbol: KDF1
KDF1
0.010 Biomarker disease BEFREE KDF1 is a novel candidate gene of non-syndromic tooth agenesis. 30384154 2019
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
0.100 GeneticVariation disease BEFREE GATA6 gene variants come along with possible features such as pancreas agenesis/hypoplasia, neonatal diabetes and congenital heart defect. 31271559 2019