Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Ninety-two pulmonary adenocarcinomas (53 women and 39 men) confirmed by clinical presentation and positive immunohistochemistry for thyroid transcription factor-1 (TTF-1) were included in this study. 19875957 2010
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE A panel comprising cytokeratin 5/6, P63, thyroid transcription factor-1, and a D-PAS stain for mucin increases diagnostic accuracy and agreement between pathologists when faced with refining a diagnosis of NSCLC to SQCC or ADC. 20068475 2010
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE TITF-1 copy number gain(CNG) was detected by FISH analysis in both adenocarcinomas (18.9%; high CNG, 8.3%) and SCCs (20.1%; high CNG, 3.0%), and correlated significantly with the protein product (P = 0.004) and presence of KRAS mutations (P = 0.008) in lung adenocarcinomas. 21257719 2011
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Most TTF-1-negative pulmonary adenocarcinomas are mucinous lesions with the predominant expression of HNF4α and MUC5AC. 21348892 2011
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Diagnostic combinations were p40-/TTF1+ or TTF1- for AD (where p40 was negative, apart from 5/30 AD showing at the best 1-2% tumor cells with low intensity); p40+/TTF1- (p40 strong and by far higher than 50%) for SQC; and p40+/TTF1+ or p40+/TTF1- (p40 strong and less than 50%) for ADSQC. 22071786 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Of 496 patients with advanced lung adenocarcinoma, 443 had TTF-1-positive adenocarcinoma. 21799026 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 AlteredExpression group BEFREE Overexpression of TTF-1 mRNA was found only in 3 (30%) of 10 NSCLC cell lines, including 1 (25%) of 4 adenocarcinoma cell lines. 22940844 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE P63 and/or cytokeratins 5 and 6 and thyroid transcription factor 1 (TTF1) are among the best predictors, respectively, of squamous and adenocarcinoma histology. 21916947 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 GeneticVariation group BEFREE These data demonstrate that NKX2-1 functions in a context-dependent manner in lung tumorigenesis and inhibits Kras(G12D)-driven mucinous pulmonary adenocarcinoma. 23143308 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Napsin A-positive adenocarcinomas were significantly more prevalent among tumors characterized as relatively small (p = 0.023), non-solid predominant (p < 0.001), non-mucinous/enteric (p < 0.001), positive for TTF-1 expression (p < 0.001), and positive for EGFR mutation (p = 0.001). 22418245 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 AlteredExpression group BEFREE Primary AC (n = 194) showed positive protein expression of NKX2-1 in 58.2% of the samples compared with 4.2% of primary SCC samples (n = 212). 22383183 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE EGFR mutations were significantly more common in tumors with thyroid transcription factor-1 (TTF-1) expression than those without TTF-1 (p < 0.001), and almost all (92.7%) mutated adenocarcinomas were TTF-1 positive. 22237264 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 AlteredExpression group BEFREE It has been hypothesized that EGFR mutations are restricted to terminal respiratory unit -type adenocarcinoma expressing thyroid transcription factor-1 (official symbol NKX2-1) as determined by immunohistochemistry. 22982653 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE The parent adenocarcinoma was positive for thyroid transcription factor-1 and cytokeratins 7. 22505007 2012
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Motivated by its specific expression pattern, pathologists adopted the NKX2-1 immunoreactivity to distinguish pulmonary from nonpulmonary nonthyroid adenocarcinomas. 23818522 2013
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE We therefore analyzed 102 large-cell carcinomas by immunohistochemistry for TTF-1 and ΔNp63/p40 as classifiers for adenocarcinoma and squamous cell carcinoma, respectively, and correlated the resulting subtypes with nine therapeutically relevant genetic alterations characteristic of adenocarcinoma (EGFR, KRAS, BRAF, MAP2K1/MEK1, NRAS, ERBB2/HER2 mutations and ALK rearrangements) or more common in squamous cell carcinoma (PIK3CA and AKT1 mutations). 23196793 2013
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 AlteredExpression group BEFREE Furthermore, lung adenocarcinomas with low EZH2 levels and high expression of the lineage-specific transcription factor, TTF-1, exhibited significantly improved RFS (P = 0.009; HR = 0.51) and OS (P = 0.0011; HR = 0.45), which was confirmed in the independent set of 91 adenocarcinomas. 24097870 2013
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Furthermore, NKX2-1 has been considered as a molecular target for the targeted therapy of AC, and [Formula: see text] other genes may be novel molecular targets. 24743794 2014
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 AlteredExpression group BEFREE The marked cytoplasmic expression of PRMT5 was frequently observed in high-grade subtypes (1 of 17 low grade, 21 of 81 intermediate grade, and 25 of 32 high grade; P < .0001) such as solid adenocarcinoma with the low expression of thyroid transcription factor 1 (the master regulator of lung) and low expression of cytokeratin 7 and E-cadherin (2 markers for bronchial epithelial differentiation), whereas the high nuclear expression of PRMT5 was frequently noted in adenocarcinoma in situ, a low-grade subtype (6 of 17 low grade, 25 of 81 intermediate grade, and 3 of 32 high grade; P = .0444). 24775604 2014
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE CLDN18.2 positive tumors were enriched among slowly proliferating, thyroid transcription factor 1 (TTF-1)-negative adenocarcinomas, suggesting that isoform-specific CLDN expression may delineate a specific subtype. 24710653 2014
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 GeneticVariation group BEFREE In summary, mixed non-mucinous bronchioloalveolar carcinoma (BAC) or papillary components and papillary predominant adenocarcinoma showed a higher frequency of EGFR mutations than mucinous BAC components; Also, EGFR mutations were significantly more common in tumors with TITF-1 or SP-A expressions than in those without (p=0.002, p=0.026), especially the sensitivity of TITF-1 (96.9%) and the negative predictive value of TITF-1 (88.2%). 24370340 2014
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE To improve segregation between ADC and SqCC in small samples, the classification of lung cancer was updated in 2011, adding immunohistochemistry (IHC) for p63 and TTF-1 to the diagnostic algorithm. 25982011 2015
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 GeneticVariation group BEFREE Between the AIS of smokers and nonsmokers, only the sex ratio was significantly different; all the other clinicopathologic factors including TTF-1 and driver mutations were not significantly different: EGFR and KRAS mutation rates (smokers:nonsmokers) were 61:58 (%) (P=0.7) and 6.1:1.4 (%) (P=0.2), respectively, whereas, in invasive adenocarcinomas, the rates were 41:69 (%) (P<0.001) and 9.4:2.3 (%) (P<0.04), respectively. 25970685 2015
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 Biomarker group BEFREE Cell differentiation lineages were unveiled by using thyroid transcription factor-1 (TTF1) for adenocarcinoma (ADC) and p40 for squamous cell carcinoma (SQC), dichotomizing immunohistochemistry (IHC) results for TTF1 as negative or positive (whatever its extent) and for p40 as negative, positive, or focal (if <10% of reactive tumor cells). 26317919 2015
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.100 GeneticVariation group BEFREE Lung mass biopsy showed adenocarcinoma with focal TTF-1 (thyroid transcription factor 1) positivity, favoring a lung primary. 26285240 2015