Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6916
Gene Symbol: TBXAS1
TBXAS1
0.010 Biomarker disease BEFREE The modulation of COX mediated pathways in UC-associated inflammation was observed by protein expressions of various pro-inflammatory cytokines such as TNF-α and enzymes of PG synthesis such as COX-2, PGES, TXAS, and anti-inflammatory PGDS. 30489199 2019
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 GeneticVariation disease BEFREE Four SNPs (rs13381619, rs9955626, rs1792658, and rs1792671) within SMAD2, one SNP within SMAD3 (rs41473580" genes_norm="4087;4088;4089;4092">rs41473580), two SNPs within SMAD4 (rs7229678 and rs9304407), and one SNP within SMAD7 (rs12956924) were significantly associated with susceptibility only to UC. rs13381619 within SMAD2, rs4147358 within SMAD3, rs9304407 within SMAD4, and rs12956924 within SMAD7 exhibited the strongest association (p <  0.001, p =  0.021, p =  0.005, and p =  0.001, respectively). 30653987 2019
Entrez Id: 814
Gene Symbol: CAMK4
CAMK4
0.010 AlteredExpression disease BEFREE In this study, active CaMKIV was highly expressed within the intestinal epithelium of humans with ulcerative colitis and wild-type (WT) mice with experimental induced colitis. 30113881 2019
Entrez Id: 1351
Gene Symbol: COX8A
COX8A
0.010 Biomarker disease BEFREE The modulation of COX mediated pathways in UC-associated inflammation was observed by protein expressions of various pro-inflammatory cytokines such as TNF-α and enzymes of PG synthesis such as COX-2, PGES, TXAS, and anti-inflammatory PGDS. 30489199 2019
Entrez Id: 875
Gene Symbol: CBS
CBS
0.010 Biomarker disease BEFREE The current study investigated the role of cystathionine β-synthase [CBS], a major producer of H2S in colon epithelial cells, in the pathogenesis of ulcerative colitis [UC]-related intestinal barrier injury. 30722010 2019
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.010 Biomarker disease BEFREE Second, 16% (4/25) of cases, all left-sided, had TP53 alteration without RB1 alteration; half of these harbored high-level amplifications in CCNE1 and MYC or MYCN and arose in patients with ulcerative colitis. 30237525 2019
Entrez Id: 8408
Gene Symbol: ULK1
ULK1
0.010 AlteredExpression disease BEFREE ULK-1 expression increased in AIEC-infected MDM from CD patients compared to MDM from UC patients or healthy subjects (<i>p</i> = 0.0056) and correlated with AIEC survival (<i>p</i> = 0.0013). 31694333 2019
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.010 Biomarker disease BEFREE Second, 16% (4/25) of cases, all left-sided, had TP53 alteration without RB1 alteration; half of these harbored high-level amplifications in CCNE1 and MYC or MYCN and arose in patients with ulcerative colitis. 30237525 2019
Entrez Id: 9420
Gene Symbol: CYP7B1
CYP7B1
0.010 Biomarker disease BEFREE We found increased mRNA expression of EBI2 and oxysterol-synthesizing enzymes (CH25H, CYP7B1) in the inflamed colon of patients with ulcerative colitis and mice with acute or chronic dextran sulfate sodium (DSS) colitis. 30742043 2019
Entrez Id: 860
Gene Symbol: RUNX2
RUNX2
0.010 Biomarker disease BEFREE CCD-18Co cells were stimulated by 1 μg/mL LPS to mimic UC <i>in vitro</i>. 31814910 2019
Entrez Id: 59345
Gene Symbol: GNB4
GNB4
0.010 Biomarker disease BEFREE Of note, the hub genes G protein subunit gamma 11 (GNG11), G protein subunit beta 4 (GNB4), Angiotensinogen (AGT), Phosphoinositide-3-kinase regulatory subunit 3 (PIK3R3) and C-C motif chemokine receptor 7 (CCR7) are disease-specific and may be used as biomarkers for differentiating UC from CD. 31258663 2019
Entrez Id: 83478
Gene Symbol: ARHGAP24
ARHGAP24
0.010 Biomarker disease BEFREE RASSF1A expression was significantly correlated with LATS1/2 in UC with dysplasia (P < 0.0001), and p73 in UC (P < 0.001), and IBD-U (P < 0.02). 30604274 2019
Entrez Id: 100271838
Gene Symbol: IBD26
IBD26
0.010 GeneticVariation disease BEFREE Using the Swedish National Patient Register, we identified 44,214 patients with IBD (26,450 with UC; 13,387 with CD; and 4377 with IBD-unclassified) from 2002 to 2014 and matched them with 436,507 individuals in the general population (control subjects). 30389589 2019
Entrez Id: 494115
Gene Symbol: RBMXL1
RBMXL1
0.010 AlteredExpression disease BEFREE The increased expression of KAT1 and KAT3 mRNA characterized the entire cohorts of patients with UC and CD, as well as relapse-remission subsets. 31666808 2019
Entrez Id: 647979
Gene Symbol: NORAD
NORAD
0.010 Biomarker disease BEFREE In addition, serum LINC00657 can distinguish adenomatous polyposis (AP) patients and/or ulcerative colitis (UC) patients from controls. 30927333 2019
Entrez Id: 60498
Gene Symbol: IGAN1
IGAN1
0.010 Biomarker disease BEFREE Conversely, rituximab failed to show an effect for antiphospholipid syndrome, autoimmune hepatitis, IgA nephropathy, inflammatory myositis, primary-progressive multiple sclerosis, systemic lupus erythematosus, and ulcerative colitis. 31555262 2019
Entrez Id: 898
Gene Symbol: CCNE1
CCNE1
0.010 Biomarker disease BEFREE Second, 16% (4/25) of cases, all left-sided, had TP53 alteration without RB1 alteration; half of these harbored high-level amplifications in CCNE1 and MYC or MYCN and arose in patients with ulcerative colitis. 30237525 2019
Entrez Id: 1803
Gene Symbol: DPP4
DPP4
0.010 GeneticVariation disease BEFREE All controlled clinical trials and observational studies of DPP-4 inhibitors that reported events of IBD, Crohn's disease (CD), ulcerative colitis (UC) or colitis and had a duration ≥52 weeks were included. 30700100 2019
Entrez Id: 8989
Gene Symbol: TRPA1
TRPA1
0.010 AlteredExpression disease BEFREE TRPA1 expression was studied by RT-PCR in inflamed colons of mice as well as in mucosal colonic biopsies of children with active UC, whose response to incubation with CBDV was also investigated. 31553934 2019
Entrez Id: 2100
Gene Symbol: ESR2
ESR2
0.010 AlteredExpression disease BEFREE Statistically significant up-regulation of GPER and ERα in both CD and UC as well as down-regulation of ERβ in CD patients was found. 31261736 2019
Entrez Id: 2185
Gene Symbol: PTK2B
PTK2B
0.010 Biomarker disease BEFREE The aim of this study was to explore the regulatory mechanism of micro ribonucleic acid (miR)-223 in ulcerative colitis (UC) through the phosphatidylinositol 3-kinase (PI3K)/protein kinase B (Akt)-mammalian target of rapamycin (mTOR) signaling pathway. 31210320 2019
Entrez Id: 54502
Gene Symbol: RBM47
RBM47
0.010 AlteredExpression disease BEFREE In addition, we demonstrated that the overexpression of Rbm47 enabled B cells to facilitate Foxp3<sup>+</sup> regulator T-cell induction and reduce the severity of DSS-induced ulcerative colitis. 29844590 2019
Entrez Id: 374
Gene Symbol: AREG
AREG
0.010 Biomarker disease BEFREE Gastrointestinal amphiregulin was significantly lower in acute graft-versus-host disease biopsies (median score 1), ulcerative colitis (median score 1.5), and cytomegalovirus colitis (median score 1) than in normal colon (median score 2, p = 0.004, p = 0.03, p = 0.009 respectively). 30425334 2019
Entrez Id: 9450
Gene Symbol: LY86
LY86
0.010 AlteredExpression disease BEFREE We discovered that MD-1 protein expression was remarkably decreased in both patients with ulcerative colitis and mice with DSS-induced colitis. 31104313 2019
Entrez Id: 25893
Gene Symbol: TRIM58
TRIM58
0.010 AlteredExpression disease BEFREE In vitro studies revealed that <i>Trim58</i><sup>-/-</sup> myeloid cells, which showed constitutive upregulation of TLR2 protein, overreacted to a proinflammatory milieu (TNF-α and IFN-γ) with increased IL-1β protein production, which mechanistically depended on <i>Tlr2</i> Finally, we found that TRIM58 mRNA and protein expression levels were reduced in colonic specimens from patients with ulcerative colitis. 31383741 2019