Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10534
Gene Symbol: ZNRD2
ZNRD2
0.010 Biomarker disease BEFREE Nuclear staining of p27 was commonly observed in the normal ovarian surface epithelium and the epithelial cells of germinal inclusion cysts. 11295040 2001
Entrez Id: 7494
Gene Symbol: XBP1
XBP1
0.010 AlteredExpression disease BEFREE XBP1 was overexpressed in endometrial tissues and its expression gradually decreased in endometriosis cysts and endometrioid ovarian carcinoma. 30250617 2018
Entrez Id: 9948
Gene Symbol: WDR1
WDR1
0.010 Biomarker disease BEFREE Moreover, loss of Aip1 impaired the apico-basal polarity of intestinal epithelial cell monolayers and inhibited formation of polarized epithelial cysts in 3-D Matrigel. 25792565 2015
Entrez Id: 738
Gene Symbol: VPS51
VPS51
0.010 Biomarker disease BEFREE Angiotensin-converting enzyme, ANG II type 1 receptor, and ANG II peptide are also present within cysts and in many tubules; and some cyst fluids contain high ANG II concentrations. 15187005 2004
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.010 Biomarker disease BEFREE We have investigated PAX2 expression and its colocalization with cytokeratin and/or vimentin in 17 biopsies of juvenile nephronophthisis (NPH), an autosomal-recessive renal disease characterized by diffuse renal fibrosis and occasional cysts. 12138259 2002
Entrez Id: 7429
Gene Symbol: VIL1
VIL1
0.010 GeneticVariation disease BEFREE By systematically characterizing the mouse model, we found that Pkd2<sup>f3/f3</sup> mice with a Cre transgene driven by the mouse villin-1 promoter (Vil-Cre;Pkd2<sup>f3/f3</sup> ) develop overt cysts in the kidney, liver and pancreas and die of end-stage renal disease (ESRD) at 4-6 months of age. 28244683 2017
Entrez Id: 7424
Gene Symbol: VEGFC
VEGFC
0.010 AlteredExpression disease BEFREE This massive hyperproliferation may have been favored by high mesenteric VEGF-C expression and was associated with VEGFR-3 phosphorylation and upregulation of the transcriptional activator TAZ Finally, intestinal lacteals fragmented into cysts or became highly distended possibly as a consequence of the mesenteric defects. 30297530 2018
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 Biomarker disease BEFREE Substantially higher VPF protein concentrations were detected in cyst fluids of the two malignant (60, 440 pM) and two borderline tumors (210, 590 pM) than in the seven benign serous cysts (mean, 10 +/- 3 pM). 8667614 1996
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 Biomarker disease LHGDN The aim of the research was to reveal vascular endothelial growth factor (VEGF) immunolocalization in endometrioma cysts and endometrial tissues. 18556049 2009
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 AlteredExpression disease BEFREE We then evaluated VEGF protein expression in human head and neck specimens containing normal epithelium (n = 10), dysplasia or carcinoma in situ (CIS; n = 15), early invasive SCCs (n = 9), advanced primary SCCs (n = 10), lymph node metastases (n = 3), and s.c. tumors or cysts (n = 7) formed in severe combined immunodeficient mice. 10213212 1999
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 Biomarker disease BEFREE The VEGF/ VPF concentration in the cyst fluid obtained from patients who required repeated aspiration or underwent surgical resection because of recurrent accumulation (84.8 +/- 58.3 ng/mL, mean +/- SD, n = 18) was significantly higher than that in the cysts that regressed or disappeared after a single aspiration (4.3 +/- 4.4 ng/mL, n = 12, P < 0.001). 9177415 1997
Entrez Id: 7416
Gene Symbol: VDAC1
VDAC1
0.010 Biomarker disease BEFREE Proteomic results of 4 proteins were further validated by reverse genomics using quantitative real time PCR assay which showed a 1388 fold and 4.35 fold increase in expression of "hypothetical protein ACA1" gene and "eukaryotic porin protein" gene respectively in trophozoites compared to cysts and a 15 fold and 12.36 fold increase in expression of "chaperone protein DnaK" gene and "chaperonin protein" gene respectively in cysts compared to trophozoites. 27030419 2016
Entrez Id: 7412
Gene Symbol: VCAM1
VCAM1
0.010 Biomarker disease BEFREE In group1, ABZ therapy induced higher expressions of ICAM-1 (intercellular adhesion molecule-1), VCAM-1 (vascular cell adhesion molecule-1), E-selectin, MCP-1 (monocyte chemotactic protein-1), Eotaxin-1, MIP-1α (macrophage inflammatory protein-1α), RANTES (regulated on activation, normal T cell expressed and secreted), MMP-2 and MMP-9 around ABZ responder (AR) cysts. 28821422 2017
Entrez Id: 57216
Gene Symbol: VANGL2
VANGL2
0.010 Biomarker disease BEFREE Candidate gene analysis on MMTV-Cre;Vangl2<sup>flox/flox</sup> and Vangl2<sup>Lp/Lp</sup> tissue reveals a significant reduction in Bmi1 expression, with overexpression of Bmi1 rescuing defects in Vangl2 knockdown cysts. 31068622 2019
Entrez Id: 7358
Gene Symbol: UGDH
UGDH
0.020 GeneticVariation disease BEFREE Our assay was specific and discriminated between G. lamblia assemblages A and B. G. lamblia cysts isolated from human feces were also analyzed with two previously described PCR-restriction fragment length polymorphism (RFLP) assays, which are based on the detection of tpi or gdh genes. 16333079 2005
Entrez Id: 7358
Gene Symbol: UGDH
UGDH
0.020 Biomarker disease BEFREE RFLP, based on the 432-bp gdh gene segment, showed 45.5% of the assemblage B cysts to be BIII and 54.5% to be BIV. 20214085 2010
Entrez Id: 7289
Gene Symbol: TULP3
TULP3
0.010 GeneticVariation disease BEFREE Mice homozygous for a hypomorphic missense mutation within the conserved Tubby domain of Tulp3 develop cysts at late embryonic stages, leading to severe postnatal loss of kidney function. 30799240 2019
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.010 Biomarker disease BEFREE While the predominant size of cysts did not differ across these three groups, TSC2 women with LAM had a significantly greater number of cysts than did TSC1 patients (p = 0.010). 19419980 2009
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.010 Biomarker disease BEFREE Tsc1 deficiency in Prx1 lineage cells caused development of mild cysts that were positive only for Tamm-Horsfall protein (THP), a loop of Henle marker, while Tsc1 deficiency in Osx lineage cells caused development of cysts that were positive for Villin, a proximal tubular cell marker. 30696882 2019
Entrez Id: 7167
Gene Symbol: TPI1
TPI1
0.020 GeneticVariation disease BEFREE Five of the original specimens inoculated into Mongolian gerbils (Meriones unguiculatus) were infective and genotyped at the tpi locus using parasite material collected from the gerbil (cysts and trophozoites). 10701587 2000
Entrez Id: 7167
Gene Symbol: TPI1
TPI1
0.020 Biomarker disease BEFREE Cyst assemblage identification of the 148- and 81-bp tpi gene segments by polymerase chain reaction showed that 8% of the cysts were assemblage A, 41% assemblage A and B combined, and 51% assemblage B. 20214085 2010
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 Biomarker disease BEFREE Ten were recurrences and five were associated with the basal-cell naevus syndrome (Gorlin-Goltz syndrome). p53 protein was found in 50% (15/30) of the odontogenic keratocysts, in 53.3% (8/15) of non-recurrent cysts, in 40% (4/10) of recurrent cysts and in 60% (3/5) of those associated with the basal-cell naevus syndrome. 8850645 1995
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 GeneticVariation disease BEFREE Longitudinal microcomputed tomography (μCT) imaging and histopathological analyses revealed an increased rate of cyst formation, increased proportion of cysts with proliferating cells, higher frequency of atypical cysts as well as the development of neoplasms in Vhl/Kif3a/Trp53 mutant kidneys compared to Kif3a/Trp53 or Vhl/Kif3a mutant kidneys. 27126173 2016
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 AlteredExpression disease BEFREE The expression of p53 protein was studied in odontogenic keratocysts (OKC, 11 solitary, 5 recurrent and 6 NBCCS cysts), radicular (RC, n = 5) and dentigerous (DC, n = 5) cysts, using a panel of antibodies to p53 (clone BP53-12, clone 1801 and polyclonal CM1) and a sensitive biotin-streptavidin method on paraffin embedded sections. 8835823 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 GeneticVariation disease BEFREE This study immunohistochemically evaluated (by Ki-67 and p53 staining) the presence of p53 signature, TILT lesions, and STIC in 14 consecutive cases of prophylactic salpingo-oophorectomy in women with BRCA-1/2 mutation (bilateral salpingo-oophorectomy), 11 cases of macroscopically inconspicuous adnexae of patients with primary contralateral tubal cancer (TC), 9 cases of primary peritoneal cancer (PPC), and 10 cases of serous ovarian borderline tumors, evaluating the fallopian tubes (using the Sectioning and Extensively Examining the FIMbria protocol), ovarian surface epithelium, and ovarian cortical inclusion cysts. 21804388 2011