Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57688
Gene Symbol: ZSWIM6
ZSWIM6
0.100 Biomarker disease HPO
Entrez Id: 23090
Gene Symbol: ZNF423
ZNF423
0.100 Biomarker disease HPO
Entrez Id: 126820
Gene Symbol: WDR63
WDR63
0.010 Biomarker disease BEFREE These are the first findings supporting a role for WDR63 in encephalocele formation. 29285825 2018
Entrez Id: 51057
Gene Symbol: WDPCP
WDPCP
0.100 Biomarker disease HPO
Entrez Id: 85015
Gene Symbol: USP45
USP45
0.100 Biomarker disease HPO
Entrez Id: 7287
Gene Symbol: TULP1
TULP1
0.100 Biomarker disease HPO
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 AlteredExpression disease BEFREE In brain tissue, levels of PAX3 were significantly reduced in both encephalocele and spina bifida subtypes; the expression levels of cleaved caspase 3(17 kD) of encephalocele cases and cleaved caspase 8(47/45 kD) in spina bifida cases were higher than in controls; no difference was found in the expression of p53 or caspase 9 between NTDs and controls. 28786179 2017
Entrez Id: 91147
Gene Symbol: TMEM67
TMEM67
0.110 Biomarker disease BEFREE Comparison of the clinical features of MKS3-linked cases with reports of MKS1- and MKS2-linked kindreds suggests that polydactyly (and possibly encephalocele) appear less common in MKS3-linked families. 12384791 2002
Entrez Id: 91147
Gene Symbol: TMEM67
TMEM67
0.110 Biomarker disease HPO
Entrez Id: 65062
Gene Symbol: TMEM237
TMEM237
0.100 Biomarker disease HPO
Entrez Id: 79583
Gene Symbol: TMEM231
TMEM231
0.100 Biomarker disease HPO
Entrez Id: 51259
Gene Symbol: TMEM216
TMEM216
0.100 Biomarker disease HPO
Entrez Id: 51524
Gene Symbol: TMEM138
TMEM138
0.100 Biomarker disease HPO
Entrez Id: 84314
Gene Symbol: TMEM107
TMEM107
0.100 Biomarker disease HPO
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.010 GeneticVariation disease BEFREE A functional indel polymorphism rs34396413 in TFAP2A intron-5 significantly increases female encephalocele risk in Han Chinese population. 31020390 2019
Entrez Id: 79867
Gene Symbol: TCTN2
TCTN2
0.100 Biomarker disease HPO
Entrez Id: 79600
Gene Symbol: TCTN1
TCTN1
0.100 Biomarker disease HPO
Entrez Id: 6949
Gene Symbol: TCOF1
TCOF1
0.100 Biomarker disease HPO
Entrez Id: 51684
Gene Symbol: SUFU
SUFU
0.010 GeneticVariation disease BEFREE A case-control study was designed to compare the frequencies of the polymorphism at four sites in the SUFU gene in control and NTDs group, as well as in subtype groups, including anencephaly, spina bifida and encephalocele. 24070372 2014
Entrez Id: 55812
Gene Symbol: SPATA7
SPATA7
0.100 Biomarker disease HPO
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.010 Biomarker disease BEFREE The highest frequency (77%) of overexpression for Nanog3 and Sox2 was observed in encephalocele and anencephalic patients, while in the comparison of regional variation, i.e., cephalic to caudal regions of NTDs, the highest frequency of downregulation (regression) of Nanog3 and Sox2 was found in lumbosacral myelomeningocele patients. 23979878 2013
Entrez Id: 23322
Gene Symbol: RPGRIP1L
RPGRIP1L
0.100 Biomarker disease HPO
Entrez Id: 57096
Gene Symbol: RPGRIP1
RPGRIP1
0.100 Biomarker disease HPO
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.100 Biomarker disease HPO
Entrez Id: 64795
Gene Symbol: RMND5A
RMND5A
0.010 GeneticVariation disease BEFREE Duplications of this region involving RMND5A, whose product contains a C-terminal to lis homology (LisH) domain, have not previously been associated with a defined phenotype but may present insight into encephalocele formation. 22681319 2012