Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5580
Gene Symbol: PRKCD
PRKCD
0.010 Biomarker group BEFREE Scopus, Web of Science, and PubMed were searched from database inception to May 1, 2018 for articles reporting skull base ECD. 30828728 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.010 Biomarker group BEFREE These enhanced CD19 ECDs significantly increase, and in some cases recover, fusion protein expression while maintaining target antigen affinity. 31242389 2019
Entrez Id: 23670
Gene Symbol: CEMIP2
CEMIP2
0.010 Biomarker group BEFREE Finally, we show that alteration of a residue important for HA depolymerization impairs the efficacy of Tmem2 function during AVC development. 31444829 2019
Entrez Id: 29994
Gene Symbol: BAZ2B
BAZ2B
0.010 Biomarker group BEFREE We predicted that these OFT-atrioventricular canal pathways were regulated by a large number of TFs actively expressed at the OFT-atrioventricular canal cardiomyocytes, with the prediction supported by motif enrichment analysis, including 10 TFs that have not been previously associated with cardiac development (eg, Etv5, Rbpms, and Baz2b). 31322043 2019
Entrez Id: 2119
Gene Symbol: ETV5
ETV5
0.010 Biomarker group BEFREE We predicted that these OFT-atrioventricular canal pathways were regulated by a large number of TFs actively expressed at the OFT-atrioventricular canal cardiomyocytes, with the prediction supported by motif enrichment analysis, including 10 TFs that have not been previously associated with cardiac development (eg, Etv5, Rbpms, and Baz2b). 31322043 2019
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.010 AlteredExpression group BEFREE We found a marked increase in CCL18 but not TGF-β1 levels in serum and lesions of ECD patients (<i>p < 0.001</i>), independently of treatment status and consistently over time. 29900045 2018
Entrez Id: 23493
Gene Symbol: HEY2
HEY2
0.010 AlteredExpression group BEFREE We found that Hey2 is expressed in the endocardial cells of the atrioventricular canal and the outflow tract, as well as at the base of trabeculae, in addition to the reported expression in the ventricular compact myocardium. 29422515 2018
Entrez Id: 4772
Gene Symbol: NFATC1
NFATC1
0.010 GeneticVariation group BEFREE When expressed in zebrafish, the three NFATC1 mutants caused cardiac looping defects and altered atrioventricular canal patterning, providing evidence of their functional relevance in vivo. 30007050 2018
Entrez Id: 9968
Gene Symbol: MED12
MED12
0.010 AlteredExpression group BEFREE We demonstrate that Med12 controls cardiac jelly formation Sox9-independently by regulating tbx2b and has2 expression and therefore the production of the glycosaminoglycan HA at the AVC to guarantee proper endocardial cushion development. 30036562 2018
Entrez Id: 860
Gene Symbol: RUNX2
RUNX2
0.010 AlteredExpression group BEFREE We examined RUNX2 expression and function in the developing avian heart as it related to the epithelial-mesenchymal transition (EMT) in the atrioventricular canal. 28631378 2018
Entrez Id: 5130
Gene Symbol: PCYT1A
PCYT1A
0.010 Biomarker group BEFREE The patient underwent radiological examinations, including <sup>18</sup> F-fluorodeoxyglucose (FDG)-positron emission tomography/computed tomography (PET/CT), bone scintigraphy and CT. A biopsy from the lesion with the highest FDG accumulation confirmed the presence of foamy macrophages, a diagnostic clue for ECD. 29603831 2018
Entrez Id: 6662
Gene Symbol: SOX9
SOX9
0.010 AlteredExpression group BEFREE We demonstrate that Med12 controls cardiac jelly formation Sox9-independently by regulating tbx2b and has2 expression and therefore the production of the glycosaminoglycan HA at the AVC to guarantee proper endocardial cushion development. 30036562 2018
Entrez Id: 6362
Gene Symbol: CCL18
CCL18
0.010 Biomarker group BEFREE These findings suggest the involvement of CCL18-induced fibrosis in ECD pathogenesis, providing a rationale for exploring CCL18 inhibition as a treatment for progressive fibrosis in ECD. 29900045 2018
Entrez Id: 221662
Gene Symbol: RBM24
RBM24
0.010 Biomarker group BEFREE Importantly, we showed that mice deficient in Rbm24 die in utero due to the endocardial cushion defect in the heart at least in part due to aberrant activation of p53-dependent apoptosis. 29358667 2018
Entrez Id: 58498
Gene Symbol: MYL7
MYL7
0.010 Biomarker group BEFREE Disordered expression of the cardiac genes, myl7, vmhc, myh6, bmp4, tbx2b and notch1b, as well as reduced number of myocardial cells and endocardial cells, indicated the collapsed development of ventricle and atrium and failed differentiation of atrioventricular canal (AVC). 29223822 2018
Entrez Id: 255743
Gene Symbol: NPNT
NPNT
0.010 Biomarker group BEFREE Recent studies revealed that NPNT is involved in kidney development, renal injury repair, atrioventricular canal differentiation, pulmonary function, and muscle cell niche maintenance. 28513838 2018
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 Biomarker group BEFREE Apoptotic cells were quantified (ED5-ED7) by whole-mount LysoTracker Red and anti-active caspase 3 staining. zVAD-treated hearts showed a significantly increased proportion of immature (base to apex) activation patterns at ED8, including ventricular activation originating from the right atrioventricular junction, a pattern never observed in control hearts. zVAD-treated hearts showed decreased numbers of apoptotic cells in the atrioventricular canal myocardium at ED7. 30152577 2018
Entrez Id: 414
Gene Symbol: ARSD
ARSD
0.010 Biomarker group BEFREE Taking ASD for reference, the following CHD lesions were at risk for IE: cyanotic CHD (adjusted OR, 9.58; 95% confidence interval, 5.38-17.05), endocardial cushion defect (ECD) (8.01; 2.73-23.50), Left-sided lesions (4.36; 1.90-10.01) and VSD (2.93; 1.64-5.23). 28811093 2017
Entrez Id: 51230
Gene Symbol: PHF20
PHF20
0.010 Biomarker group BEFREE Higher cell affinity was observed on NANOZR-E when compared with ECD treated 3Y-TZP. 27783470 2017
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.010 AlteredExpression group BEFREE ECD significantly increased the expression of mitochondria-dependent apoptotic pathway-related genes after 48h; we observed significantly (p≤0.05) increased expression of CYP1A, GPX, GSK3β and TNF-α and downregulated expression of NF-κB. 28068628 2017
Entrez Id: 6098
Gene Symbol: ROS1
ROS1
0.010 Biomarker group BEFREE ECD significantly triggered intracellular ROS generation even from the lower doses of 0.6 and 1.2μM; and it is relative to higher dose of 2.4μM. 28068628 2017
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 Biomarker group BEFREE IL-6 emerges as a central mediator in ECD pathogenesis. 28680751 2017
Entrez Id: 9464
Gene Symbol: HAND2
HAND2
0.010 Biomarker group BEFREE These results show that HAND2 directly regulates the molecular cascades initiating AVC cardiac valve development. 28538179 2017
Entrez Id: 6615
Gene Symbol: SNAI1
SNAI1
0.010 AlteredExpression group BEFREE Re-expression of Snai1 in mutant AVC explants partially restores this EMT and mesenchymal cell migration. 28538179 2017
Entrez Id: 57167
Gene Symbol: SALL4
SALL4
0.010 Biomarker group BEFREE The presence of single atrioventricular canal instead of the atrial septal defect typical for Holt-Oram syndrome pointed us to rather suspect the SALL4 related diseases. 28807863 2017