Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 55755
Gene Symbol: CDK5RAP2
CDK5RAP2
0.010 Biomarker group BEFREE Here we support the link between CDK5RAP2 and eye development by showing that most Cdk5rap2 mutant mice (an/an) exhibit eye malformations ranging from reduced size of one or both eyes (microphthalmia) to total absence of both eyes (anophthalmia). 31355417 2020
Entrez Id: 1301
Gene Symbol: COL11A1
COL11A1
0.010 GeneticVariation group BEFREE Variants in this alternatively spliced region of COL11A1 have been identified to cause an autosomal recessive form of Stickler syndrome type 2 characterized by sensorineural hearing loss and eye abnormalities, but without musculoskeletal abnormalities. 31833174 2020
Entrez Id: 4041
Gene Symbol: LRP5
LRP5
0.010 GeneticVariation group BEFREE Since these individuals have no eye abnormalities (which occur in individuals completely lacking LRP5) and have neither limb nor brain patterning defects (both of which occur in mice completely lacking LRP6), we infer that bone mass accrual and dental patterning are more sensitive to reduced canonical WNT signaling than are other developmental processes. 31564437 2019
Entrez Id: 54681
Gene Symbol: P4HTM
P4HTM
0.010 GeneticVariation group BEFREE Five different homozygous or compound heterozygous pathogenic P4HTM gene variants were identified in six new and six previously published patients presenting with HIDEA. 30940925 2019
Entrez Id: 2703
Gene Symbol: GJA8
GJA8
0.010 GeneticVariation group BEFREE Following screening of GJA8 in a cohort of 426 individuals with severe congenital eye anomalies, primarily anophthalmia, microphthalmia and coloboma, we identified four known [p.(Thr39Arg), p.(Trp45Leu), p.(Asp51Asn), and p.(Gly94Arg)] and two novel [p.(Phe70Leu) and p.(Val97Gly)] likely pathogenic variants in seven families. 29464339 2019
Entrez Id: 4040
Gene Symbol: LRP6
LRP6
0.010 Biomarker group BEFREE Since these individuals have no eye abnormalities (which occur in individuals completely lacking LRP5) and have neither limb nor brain patterning defects (both of which occur in mice completely lacking LRP6), we infer that bone mass accrual and dental patterning are more sensitive to reduced canonical WNT signaling than are other developmental processes. 31564437 2019
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.010 Biomarker group BEFREE In the following induced high IOP animal model, the expression of GABA-A/B receptors within the ARC was evaluated in <i>DBA/2J</i> mice which developed progressive eye abnormalities spontaneously that closely mimic human hereditary glaucoma. 30174387 2018
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 Biomarker group BEFREE Caspase-3, head involution defective and reaper-dependent apoptosis genes may have been responsible for compound eye abnormalities in flies exposed to azadirachtin. 30048948 2018
Entrez Id: 8378
Gene Symbol: LOH19CR1
LOH19CR1
0.010 Biomarker group BEFREE In the following induced high IOP animal model, the expression of GABA-A/B receptors within the ARC was evaluated in <i>DBA/2J</i> mice which developed progressive eye abnormalities spontaneously that closely mimic human hereditary glaucoma. 30174387 2018
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.010 GeneticVariation group BEFREE These rearrangements included a deletion of GCH1, which likely contributes to the dopa-responsive dystonia, as well as a deletion of BMP4 as a potential cause of digital and eye abnormalities. 28558098 2017
Entrez Id: 2643
Gene Symbol: GCH1
GCH1
0.010 GeneticVariation group BEFREE We examined 10 members of a family, including 5 patients with dopa-responsive dystonia and skeletal and/or eye abnormalities, from a US tertiary referral center for neurological diseases using multiple conventional molecular methods, including fluorescence in situ hybridization and array comparative genomic hybridization as well as large-insert whole-genome sequencing to survey multiple classes of genomic variations. 28558098 2017
Entrez Id: 6297
Gene Symbol: SALL2
SALL2
0.010 Biomarker group BEFREE Consistently, SALL2 deficiency associates with neural tube defects and coloboma, a congenital eye disease. 28430874 2017
Entrez Id: 79068
Gene Symbol: FTO
FTO
0.010 GeneticVariation group BEFREE We further expand on the phenotype of homozygous FTO loss-of-function mutations to include eye abnormalities, gingival overgrowth, craniosynostosis, and cutaneous photosensitivity. 26697951 2016
Entrez Id: 23094
Gene Symbol: SIPA1L3
SIPA1L3
0.010 AlteredExpression group BEFREE Decreased expression of Sipa1l3 in zebrafish and mouse caused severe lens and eye abnormalities. 26231217 2015
Entrez Id: 7846
Gene Symbol: TUBA1A
TUBA1A
0.010 GeneticVariation group BEFREE TUBA1A Mutation Associated With Eye Abnormalities in Addition to Brain Malformation. 26294046 2015
Entrez Id: 6201
Gene Symbol: RPS7
RPS7
0.010 Biomarker group BEFREE Rps7 disruption results in decreased body size, abnormal skeletal morphology, mid-ventral white spotting, and eye malformations. 23382688 2013
Entrez Id: 64220
Gene Symbol: STRA6
STRA6
0.010 GeneticVariation group BEFREE The current study demonstrates that STRA6 mutations can cause isolated eye malformations in addition to the congenital anomalies observed in MWS. 21901792 2011
Entrez Id: 6736
Gene Symbol: SRY
SRY
0.010 Biomarker group BEFREE Sex determining region Y (SRY)-box 2 (SOX2) anophthalmia syndrome is an autosomal dominant disorder manifesting as severe developmental eye malformations associated with brain, esophageal, genital, and kidney abnormalities. 22171155 2011
Entrez Id: 266553
Gene Symbol: OFCC1
OFCC1
0.010 GeneticVariation group BEFREE Mutations in the Opo gene result in eye malformation in medaka fish. 22242126 2011
Entrez Id: 55624
Gene Symbol: POMGNT1
POMGNT1
0.010 Biomarker group BEFREE Together, our data demonstrate that post-translational modification on O-mannose, which is mediated by Large and POMGnT1, is essential for pikachurin binding and proper localization, and suggest that their disruption underlies the molecular pathogenesis of eye abnormalities in a group of muscular dystrophies. 20682766 2010
Entrez Id: 79644
Gene Symbol: SRD5A3
SRD5A3
0.010 GeneticVariation group BEFREE Here, we report on the clinical, genetic and metabolic features of 12 patients from nine families with cerebellar ataxia and congenital eye malformations diagnosed with SRD5A3-congenital disorders of glycosylation due to steroid 5α-reductase type 3 defect. 20852264 2010
Entrez Id: 133584
Gene Symbol: EGFLAM
EGFLAM
0.010 Biomarker group BEFREE Together, our data demonstrate that post-translational modification on O-mannose, which is mediated by Large and POMGnT1, is essential for pikachurin binding and proper localization, and suggest that their disruption underlies the molecular pathogenesis of eye abnormalities in a group of muscular dystrophies. 20682766 2010
Entrez Id: 3052
Gene Symbol: HCCS
HCCS
0.010 GeneticVariation group BEFREE In a cohort of 27 females obtained from a population-based study on infants and fetuses with congenital eye malformations we performed mutation analysis of HCCS by PCR amplification of the coding exons and direct sequencing. 17893649 2007
Entrez Id: 7101
Gene Symbol: NR2E1
NR2E1
0.010 Biomarker group BEFREE In fierce mutants carrying human NR2E1, structural brain defects were eliminated and eye abnormalities ameliorated. 16000615 2005
Entrez Id: 4990
Gene Symbol: SIX6
SIX6
0.010 GeneticVariation group BEFREE No evidence was found that SIX6 mutations underlie human congenital structural eye malformations. 15505031 2004