Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4978
Gene Symbol: OPCML
OPCML
0.010 AlteredExpression group BEFREE The significant difference of methylation levels of OPCML and HOXD9 was observed in serum cfDNA of CCA compared to other biliary diseases. 30832707 2019
Entrez Id: 342096
Gene Symbol: GOLGA6A
GOLGA6A
0.010 GeneticVariation group BEFREE GLP-2 receptor activation in rodents acutely increases the volume of the gallbladder, which might explain the risk of gallbladder diseases associated with GLP-2RA treatment observed in humans. 30137354 2019
Entrez Id: 55213
Gene Symbol: RCBTB1
RCBTB1
0.010 GeneticVariation group BEFREE GLP-2 receptor activation in rodents acutely increases the volume of the gallbladder, which might explain the risk of gallbladder diseases associated with GLP-2RA treatment observed in humans. 30137354 2019
Entrez Id: 3235
Gene Symbol: HOXD9
HOXD9
0.010 AlteredExpression group BEFREE The significant difference of methylation levels of OPCML and HOXD9 was observed in serum cfDNA of CCA compared to other biliary diseases. 30832707 2019
Entrez Id: 79813
Gene Symbol: EHMT1
EHMT1
0.010 GeneticVariation group BEFREE GLP-2 receptor activation in rodents acutely increases the volume of the gallbladder, which might explain the risk of gallbladder diseases associated with GLP-2RA treatment observed in humans. 30137354 2019
Entrez Id: 5165
Gene Symbol: PDK3
PDK3
0.010 AlteredExpression group BEFREE The PDK3 isoform levels in the sera were measured using a dot blot assay for 39 patients with CCA, 20 patients with benign biliary disease and 19 healthy volunteers. 31186744 2019
Entrez Id: 6387
Gene Symbol: CXCL12
CXCL12
0.010 AlteredExpression group BEFREE Serum CXCL10, CXCL11 and CXCL12 levels were elevated in all the studied groups except biliary diseases for CXCL11. 29880273 2018
Entrez Id: 151306
Gene Symbol: GPBAR1
GPBAR1
0.010 Biomarker group BEFREE Not only the stimulation of TGR5-mediated pathways by suitable TGR5 agonists but also the inhibition of TGR5 signalling by the use of antagonists represent potential therapeutic approaches for different types of biliary diseases. 28844960 2018
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.010 GeneticVariation group BEFREE We have developed a mouse model of biliary senescence, based on the conditional deletion of Mdm2 in bile ducts under the control of the Krt19 promoter, that exhibits features of biliary disease. 29523787 2018
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 AlteredExpression group BEFREE Serum CXCL10, CXCL11 and CXCL12 levels were elevated in all the studied groups except biliary diseases for CXCL11. 29880273 2018
Entrez Id: 6373
Gene Symbol: CXCL11
CXCL11
0.010 Biomarker group BEFREE Serum CXCL10, CXCL11 and CXCL12 levels were elevated in all the studied groups except biliary diseases for CXCL11. 29880273 2018
Entrez Id: 64127
Gene Symbol: NOD2
NOD2
0.010 GeneticVariation group BEFREE This first study on genetic susceptibility in SC-CIP patients shows an extraordinary high frequency of NOD2 variation, pointing to a critical role of inherited impaired anti-bacterial defense in the development of this devastating biliary disease. 28765628 2017
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 Biomarker group BEFREE Our study found that B*08, DRB1*03 and DRB1*13 were significantly associated with autoimmune liver and biliary diseases in Finnish paediatric patients. 27759901 2017
Entrez Id: 2813
Gene Symbol: GP2
GP2
0.010 Biomarker group BEFREE Enzyme-linked immunosorbent assays (ELISAs) were developed to evaluate human glycoprotein 2 isoform alpha (GP2a) and total GP2 (GP2t) as specific markers for acute pancreatitis in sera of 153 patients with acute pancreatitis, 26 with chronic pancreatitis, 125 with pancreatic neoplasms, 324 with non-pancreatic neoplasms, 109 patients with liver/biliary disease, 67 with gastrointestinal disease, and 101 healthy subjects. 27837595 2017
Entrez Id: 1036
Gene Symbol: CDO1
CDO1
0.010 PosttranslationalModification group BEFREE CDO1 DNA methylation was quantified using quantitative TaqMan methylation specific PCR (Q-MSP) in 99 primary GBC patients together with the 78 corresponding non-tumor tissues and 26 benign gallbladder disease (including 7 patients with xanthogranulomatous cholecystitis) who underwent surgical resection between 1986 and 2014. 29161283 2017
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.010 Biomarker group BEFREE Our study found that B*08, DRB1*03 and DRB1*13 were significantly associated with autoimmune liver and biliary diseases in Finnish paediatric patients. 27759901 2017
Entrez Id: 2740
Gene Symbol: GLP1R
GLP1R
0.010 Biomarker group BEFREE Unexpectedly, reports of gallbladder disease have been associated with the use of both GLP-1R and GLP-2R agonists and after bariatric surgery, although the mechanisms remain unknown. 28580281 2017
Entrez Id: 64240
Gene Symbol: ABCG5
ABCG5
0.010 GeneticVariation group BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.010 GeneticVariation group BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
Entrez Id: 158219
Gene Symbol: TTC39B
TTC39B
0.010 GeneticVariation group BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.010 Biomarker group BEFREE Only one case of biliary disease has been described so far.GPC3 is localized on Xq26. 24357529 2014
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.010 AlteredExpression group BEFREE Different expression of S100A8 in malignant and benign gallbladder diseases. 22806545 2013
Entrez Id: 406991
Gene Symbol: MIR21
MIR21
0.010 Biomarker group BEFREE Plasma miR-21 is a novel diagnostic biomarker for BTC, and may be useful in distinguishing between BTC and BBD patients. 24118467 2013
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.010 GeneticVariation group BEFREE Present study was designed to investigate the role of VEGF polymorphism in GBC and in other (benign) gallbladder diseases, that is chronic cholecystitis (CC) and xanthogranulomatous cholecystitis (XGC). 23962084 2013
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.010 GeneticVariation group LHGDN UGT1A1 genotyping should be considered as a screening tool for predicting children most likely to develop gallbladder disease at a young age. 18756540 2008