Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.010 PosttranslationalModification group BEFREE This study demonstrates: (a) a high frequency and specificity of INK4a/ARF methylation in malignant biliary disease compared with mere cholangitis; and (b) the capability to detect these alterations reliably in endoscopically obtained bile. 12738733 2003
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 Biomarker group BEFREE Our study found that B*08, DRB1*03 and DRB1*13 were significantly associated with autoimmune liver and biliary diseases in Finnish paediatric patients. 27759901 2017
Entrez Id: 64240
Gene Symbol: ABCG5
ABCG5
0.010 GeneticVariation group BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
Entrez Id: 2813
Gene Symbol: GP2
GP2
0.010 Biomarker group BEFREE Enzyme-linked immunosorbent assays (ELISAs) were developed to evaluate human glycoprotein 2 isoform alpha (GP2a) and total GP2 (GP2t) as specific markers for acute pancreatitis in sera of 153 patients with acute pancreatitis, 26 with chronic pancreatitis, 125 with pancreatic neoplasms, 324 with non-pancreatic neoplasms, 109 patients with liver/biliary disease, 67 with gastrointestinal disease, and 101 healthy subjects. 27837595 2017
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.010 Biomarker group BEFREE Only one case of biliary disease has been described so far.GPC3 is localized on Xq26. 24357529 2014
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
0.010 GeneticVariation group BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.010 GeneticVariation group BEFREE During a multicenter prospective study on mutations in the K-ras gene in pancreatic and biliary diseases, hospital diagnoses from 602 patients were reviewed by a panel of experts. 10086813 1998
Entrez Id: 907
Gene Symbol: CCT
CCT
0.010 GeneticVariation group BEFREE This study analyzed intrahepatic bile, bile duct tissue, and gallstones from 43 patients with hepatobiliary disease (PTCS group), gallbladder bile and tissue from 23 patients with gallbladder disease (CCT group), and eight patients without hepatobiliary disease (control group). 10961722 2000
Entrez Id: 158219
Gene Symbol: TTC39B
TTC39B
0.010 GeneticVariation group BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
Entrez Id: 1071
Gene Symbol: CETP
CETP
0.010 Biomarker group BEFREE Restriction fragment length polymorphisms (RFLPs) of apolipoprotein B (XbaI, EcoRI), apolipoprotein A-I (PstI, MspI), and cholesteryl ester transfer protein (CETP) (EcoNI, TaqIA, TaqIB) genes were examined in a series of 210 cholecystectomy patients operated on for symptomatic gallbladder disease and in 92 healthy controls. 7616125 1995
Entrez Id: 1586
Gene Symbol: CYP17A1
CYP17A1
0.010 GeneticVariation group BEFREE In view of reports linking the CYP17 MspA1 polymorphism to high circulating levels of estrogens and a predisposition to other hormonally related cancers, we examined the relationship between CYP17 MspA1 variants and risk of biliary disease in a population-based case-control study in Shanghai. 16381022 2006
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.010 GeneticVariation group BEFREE Present study was designed to investigate the role of VEGF polymorphism in GBC and in other (benign) gallbladder diseases, that is chronic cholecystitis (CC) and xanthogranulomatous cholecystitis (XGC). 23962084 2013
Entrez Id: 3235
Gene Symbol: HOXD9
HOXD9
0.010 AlteredExpression group BEFREE The significant difference of methylation levels of OPCML and HOXD9 was observed in serum cfDNA of CCA compared to other biliary diseases. 30832707 2019
Entrez Id: 1036
Gene Symbol: CDO1
CDO1
0.010 PosttranslationalModification group BEFREE CDO1 DNA methylation was quantified using quantitative TaqMan methylation specific PCR (Q-MSP) in 99 primary GBC patients together with the 78 corresponding non-tumor tissues and 26 benign gallbladder disease (including 7 patients with xanthogranulomatous cholecystitis) who underwent surgical resection between 1986 and 2014. 29161283 2017
Entrez Id: 79813
Gene Symbol: EHMT1
EHMT1
0.010 GeneticVariation group BEFREE GLP-2 receptor activation in rodents acutely increases the volume of the gallbladder, which might explain the risk of gallbladder diseases associated with GLP-2RA treatment observed in humans. 30137354 2019
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.010 AlteredExpression group BEFREE In all 78 consecutive patients of gall bladder diseases were studied for p53 and c-erbB-2 expression immunohistochemically and their expression was correlated with the age, grades and stages of the disease and presence of stone. 16686942 2006
Entrez Id: 9166
Gene Symbol: EBAG9
EBAG9
0.010 AlteredExpression group BEFREE Here we examined RCAS1 expression in biliary diseases. 12044529 2002
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.010 GeneticVariation group BEFREE We have developed a mouse model of biliary senescence, based on the conditional deletion of Mdm2 in bile ducts under the control of the Krt19 promoter, that exhibits features of biliary disease. 29523787 2018
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.010 Biomarker group BEFREE Our study found that B*08, DRB1*03 and DRB1*13 were significantly associated with autoimmune liver and biliary diseases in Finnish paediatric patients. 27759901 2017
Entrez Id: 5165
Gene Symbol: PDK3
PDK3
0.010 AlteredExpression group BEFREE The PDK3 isoform levels in the sera were measured using a dot blot assay for 39 patients with CCA, 20 patients with benign biliary disease and 19 healthy volunteers. 31186744 2019
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 AlteredExpression group BEFREE Serum CXCL10, CXCL11 and CXCL12 levels were elevated in all the studied groups except biliary diseases for CXCL11. 29880273 2018
Entrez Id: 2740
Gene Symbol: GLP1R
GLP1R
0.010 Biomarker group BEFREE Unexpectedly, reports of gallbladder disease have been associated with the use of both GLP-1R and GLP-2R agonists and after bariatric surgery, although the mechanisms remain unknown. 28580281 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 AlteredExpression group BEFREE In all 78 consecutive patients of gall bladder diseases were studied for p53 and c-erbB-2 expression immunohistochemically and their expression was correlated with the age, grades and stages of the disease and presence of stone. 16686942 2006
Entrez Id: 54658
Gene Symbol: UGT1A1
UGT1A1
0.010 Biomarker group BEFREE UGT1A1 genotyping should be considered as a screening tool for predicting children most likely to develop gallbladder disease at a young age. 18756540 2008
Entrez Id: 6373
Gene Symbol: CXCL11
CXCL11
0.010 Biomarker group BEFREE Serum CXCL10, CXCL11 and CXCL12 levels were elevated in all the studied groups except biliary diseases for CXCL11. 29880273 2018