Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.490 Biomarker disease HPO
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.150 Biomarker disease HPO
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.110 Biomarker disease HPO
Entrez Id: 999
Gene Symbol: CDH1
CDH1
0.110 Biomarker disease HPO
Entrez Id: 2520
Gene Symbol: GAST
GAST
0.100 AlteredExpression disease BEFREE In both groups, mean gastric acid output decreased and mean fasting serum gastrin levels and the prevalence of atrophic gastritis increased with age. 432534 1979
Entrez Id: 2520
Gene Symbol: GAST
GAST
0.100 Biomarker disease BEFREE The results recommend serum PG I and serum gastrin, but not parietal cell antibody, as tests for severe atrophic gastritis in relatives of patients with pernicious anemia. 456206 1979
Entrez Id: 7039
Gene Symbol: TGFA
TGFA
0.020 AlteredExpression disease BEFREE Concurrent expression of TGF alpha and EGFR (greater than or equal to + level) was more frequent in the paired tumors (38%) than in adjacent nonmalignant tissue (6%) and was seen in only one of 14 (7%) normal samples, in three of 19 (16%) of those with AG, and none of eight of those displaying SG. 2702651 1989
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.010 AlteredExpression disease BEFREE Concurrent expression of TGF alpha and EGFR (greater than or equal to + level) was more frequent in the paired tumors (38%) than in adjacent nonmalignant tissue (6%) and was seen in only one of 14 (7%) normal samples, in three of 19 (16%) of those with AG, and none of eight of those displaying SG. 2702651 1989
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 AlteredExpression disease BEFREE Chronic atrophic gastritis with complete intestinal metaplasia (IM) was seen in three patients. p53 protein was not expressed in any of the cases. 8319165 1993
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.030 GeneticVariation disease BEFREE Immunogenetic analysis of the human leukocyte antigen DQA1 locus in patients with duodenal ulcer or chronic atrophic gastritis harbouring Helicobacter pylori. 8574742 1995
Entrez Id: 643834
Gene Symbol: PGA3
PGA3
0.020 Biomarker disease BEFREE Unexpressed Pg3 encoding genes can be shown in many cases of atrophic gastritis and gastric cancer, but rarely in healthy controls and subjects with superficial gastritis. 7615861 1995
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.050 Biomarker disease BEFREE Accumulating evidence suggests an important role of interleukin-8 (IL-8) in Helicobacter pylori infection-associated chronic atrophic gastritis and peptic ulcer. 9234778 1997
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.010 Biomarker disease BEFREE LMP-1 was detected in areas of intestinal metaplasia in eight patients with chronic atrophic gastritis. 9422984 1997
Entrez Id: 5225
Gene Symbol: PGC
PGC
0.100 Biomarker disease BEFREE Serum PGA and PGC values and the PGA/PGC ratio did not differ significantly among HLA-DQA1 genotypes; however, the PGA/PGC ratio was significantly lower in the H. pylori (+) atrophic gastritis and H. pylori (+) intestinal type gastric adenocarcinoma groups than in the H. pylori (-) normal control and H. pylori (+) superficial gastritis groups. 9506344 1998
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
0.030 Biomarker disease BEFREE The allele frequency of DQA1*0102 was significantly lower in the H. pylori (+) atrophic gastritis group than in the H. pylori (+) superficial gastritis and H. pylori (-) normal control groups. 9506344 1998
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.110 GeneticVariation disease BEFREE Among those participants with atrophic gastritis without metaplasia, 19.4% (6 of 25) contained KRAS mutations, indicating that mutation of this important gene is likely an early event in the etiology of gastric carcinoma. 10067815 1999
Entrez Id: 2520
Gene Symbol: GAST
GAST
0.100 AlteredExpression disease BEFREE Autoimmune atrophic gastritis patients were younger, mainly females, with a significantly higher serum gastrin level than the H. pylori-associated atrophic gastritis group (P < 0.001). 10219822 1999
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.020 AlteredExpression disease BEFREE Expression of bcl-2 in autoimmune and Helicobacter pylori-associated atrophic gastritis. 10219822 1999
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.010 GeneticVariation disease BEFREE HLA-DQB1 genotyping was performed by the polymerase chain reaction-restriction fragment length polymorphism method on 122 H. pylori-infected patients with atrophic gastritis and 28 uninfected Japanese controls. 10616761 1999
Entrez Id: 2520
Gene Symbol: GAST
GAST
0.100 Biomarker disease BEFREE The large majority of gastric neuroendocrine tumors is made by benign, gastrin-dependent, well-differentiated ECL cell growths arising in a background of chronic atrophic gastritis (type I) or, more rarely, associated with type I multiple endocrine neoplasia (MEN I) and Zollinger-Ellison (ZE) syndromes (type II). 10738315 2000
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.050 AlteredExpression disease BEFREE IL-8 levels were higher in patients with atrophic gastritis than in patients with nonatrophic gastritis (p < 0.05). 10927930 2000
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.020 Biomarker disease BEFREE Determining the relationship between the genotypes and clinical features, we found that the cagA gene was more closely associated with duodenal ulcer than with gastric ulcer and the vacA s1a/m2 strain was more closely associated with active chronic gastritis and atrophic gastritis than with chronic gastritis. 10716078 2000
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.040 AlteredExpression disease LHGDN Expression of Cdx1 and Cdx2 mRNAs and relevance of this expression to differentiation in human gastrointestinal mucosa--with special emphasis on participation in intestinal metaplasia of the human stomach. 11846061 2001
Entrez Id: 4582
Gene Symbol: MUC1
MUC1
0.030 GeneticVariation disease BEFREE These findings show that MUC1 polymorphism may define different susceptibility backgrounds for the development of conditions that precede gastric carcinoma: chronic atrophic gastritis (CAG) and intestinal metaplasia (IM). 11464247 2001
Entrez Id: 326
Gene Symbol: AIRE
AIRE
0.010 GeneticVariation disease BEFREE Heterozygous mutations of AIRE were identified in 3 patients: a patient with PBC and a patient with AIH type 1 carried a R257X mutation, and a patient with AIH type 2, diabetes mellitus type 1 (IDDM), thyroid disease, and atrophic gastritis carried a G305S mutation in the first PHD ring finger domain of the AIRE protein. 11343230 2001