Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 Biomarker group BEFREE HPV 16 and/or 18 were detected in 156 (80%) tumors. p16 was positive in 186 (96%) carcinomas, but eight tumors (4%) were negative for p16 (seven squamous cell carcinomas, one adenocarcinoma); 5/8 caused by HPV 16 and/or 18. 31492932 2020
Entrez Id: 7015
Gene Symbol: TERT
TERT
0.500 Biomarker group BEFREE Therefore, the development of telomere-based therapies such as nucleoside analogs, non-nucleoside small molecules, antisense technology, ribozymes, and dominant negative human telomerase reverse transcriptase are being prioritized for eradicating a majority of tumors. 31361345 2020
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 Biomarker group BEFREE Genome-wide sequencing analyses of metastatic variants identified semaphorin 4D (SEMA4D) as a regulator of tumor cell transmigration through the blood-brain-barrier and MYC as a crucial regulator for the adaptation of disseminated tumor cells to the activated brain microenvironment. 31601552 2020
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 GeneticVariation group BEFREE The highest CPA was found in breast cancer patients with a hereditary predisposition bearing BRCA1 gene mutations, and the lowest activity was found in patients who had a tumour surgically removed and before adjuvant therapy. 31683457 2020
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 GeneticVariation group BEFREE A total of 4206 tumour samples were evaluated for BRCA1 and 1041 for BRCA2 expression. 31719105 2020
Entrez Id: 7015
Gene Symbol: TERT
TERT
0.500 GeneticVariation group BEFREE In the recurrent tumors, 2 TERT promotor mutations differ from the primary tumor. 31521529 2020
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 Biomarker group BEFREE With the approval of the poly (ADP-ribose) polymerase (PARP) inhibitor olaparib for newly diagnosed, breast cancer gene <i>(BRCA)1/2</i> mutated, ovarian cancer women, the assessment of <i>BRCA1/2</i> tumour status will be shortly required at the time of diagnosis. 31537627 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 AlteredExpression group BEFREE Seven tissue microarrays were constructed. p16 protein expression was studied in 114 cases, of which 35/114 (30.7%) cases showed strong expression and the majority of them had ER-positive tumor (57.6%), and it was statistically significant (P < 0.0074). 31603125 2020
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 Biomarker group BEFREE miR-29a is repressed by MYC in pancreatic cancer and its restoration drives tumor suppressive effects via downregulation of LOXL2. 31662451 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 Biomarker group BEFREE Palbociclib is a CDK4 inhibitor with preclinical antitumor efficacy in tumors with P16/CDKN2A loss. 30979737 2019
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 GeneticVariation group BEFREE Consistent with earlier studies, TP53 mutations were present in the majority (96.6%) of the tumors studied, and mutations in BRCA1/2 that affect DNA repair were also detected frequently in 20.5% of the tumors. 31124283 2019
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 AlteredExpression group BEFREE Macrophage function and tumor-cell MYC expression may contribute to the PD-1-independent adverse prognostic effect of PD-L1<sup>+</sup> expression. 30666052 2019
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 Biomarker group BEFREE In mouse mammary tumors, we showed that Procr<sup>+</sup> cells are enriched for cancer stem cells (CSCs) in Wnt1 basal-like tumors, but not in Brca1 basal-like tumors or PyVT luminal tumors. 31481760 2019
Entrez Id: 472
Gene Symbol: ATM
ATM
0.500 Biomarker group BEFREE ATM is a well-established tumour suppressor. 31565865 2019
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 AlteredExpression group BEFREE These findings establish MYC repression as a mechanism for ZFHX3's tumor suppressor activity and ZFHX3 as an indispensable factor for ERβ's tumor suppressor activity in prostate cancer cells. 30979864 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 Biomarker group BEFREE Furthermore, methylated RASSF1A and p14/ARF were associated with the grade of CRC but not associated with the age of patients, family history, or tumor location. 30989570 2019
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 Biomarker group BEFREE Because BRCA1 is highly expressed in neuronal progenitor cells during early development<sup>4</sup> and MYC is less efficient than MYCN in recruiting BRCA1, our findings indicate that a cell-lineage-specific stress response enables MYCN-driven tumours to cope with deregulated RNAPII function. 30894746 2019
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 Biomarker group BEFREE We used human and mouse tumor-derived cell lines, tumor xenografts, and four conditional transgenic mouse models of MYC-induced tumors to show that MYC regulates lipogenesis genes, enzymes, and metabolites. 31447321 2019
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 Biomarker group BEFREE A total of 29/61 (48%) <i>BRCA1/2</i>-associated patients relapsed as a single local tumor; this was lower in sporadic cancer patients (38/134 (28%); p=0.01). 30839285 2019
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.500 Biomarker group BEFREE Knockdown of various candidate genes led to tumor suppressor phenotypes also observed in BRCA1/BRCA2 deficient cells. 31078449 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 Biomarker group BEFREE Additional FISH analyses detected a 9p21/CDKN2A double deletion, frequently reported in melanomas but not in nevi, in the tumor initially diagnosed as a Spitz nevus with a favor malignant p16-Ki-67-HMB45 score. 28362709 2019
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 Biomarker group BEFREE The changes in tumor cell metabolism after EPHB4 inhibition were associated with MYC downregulation, likely mediated by the SRC/p38 MAPK/4EBP1 signaling cascade, known to impair cap-dependent translation. 31641103 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 GeneticVariation group BEFREE TERT promoter mutation, H3F3A mutation, CDKN2A loss) in this tumor group. 30298540 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.500 GeneticVariation group BEFREE The total mutational burden was similar between human papillomavirus (HPV)-negative vs. positive tumors, although TP53, CDKN2A and CCND1 gene alterations occurred more frequently in HPV-negative tumors. 29747488 2019
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.500 Biomarker group BEFREE To date, functions of PLK1 and MYC on tumor are mostly studied in separate researches, and studies on their mutual crosstalk are lacking. 31571905 2019