Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.010 AlteredExpression group LHGDN Impaired ABCA1-dependent lipid efflux and hypoalphalipoproteinemia in human Niemann-Pick type C disease. 12813037 2003
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker group BEFREE In addition, novel selection procedures were developed to separate retrovirally corrected and noncorrected NPD fibroblasts based on the receptor-mediated delivery of a fluorescently (pyrene)-labeled sphingomyelin (P12-SPM) to the lysosomes of cells using liposomes coated with apolipoprotein E. In this study, we have used a different, fluorescent derivative of sphingomyelin (lissamine-rhodamine dodecanoyl sphingomyelin; LR12-SPM) to extend and improve this selection system. 1482703 1992
Entrez Id: 1118
Gene Symbol: CHIT1
CHIT1
0.020 AlteredExpression group BEFREE Plasma chitotriosidase activity is used to diagnose and monitor some forms of lysosomal storage disorders, such as Gaucher's and Niemann-Pick disease. 26624962 2016
Entrez Id: 1118
Gene Symbol: CHIT1
CHIT1
0.020 AlteredExpression group BEFREE Median chitotriosidase activity was 12 655 nmol/h per ml (interquartile range 4693-20982) in Gaucher disease (GD); 780 (465-1298) in SMD (sphingomyelinase deficiency); 925 (319-1215) in NPC and 50 (29-54) in patients with miscellaneous diseases. 16972172 2006
Entrez Id: 1508
Gene Symbol: CTSB
CTSB
0.020 AlteredExpression group BEFREE Cathepsin B overexpression due to acid sphingomyelinase ablation promotes liver fibrosis in Niemann-Pick disease. 22102288 2012
Entrez Id: 1508
Gene Symbol: CTSB
CTSB
0.020 Biomarker group BEFREE The intracellular proteins cathepsin B and L, two-pore channel 1 and 2, and bona fide receptor Niemann⁻Pick Disease C1 (NPC1) are essential for the endosomal phase of cell entry. 30893855 2019
Entrez Id: 2581
Gene Symbol: GALC
GALC
0.010 Biomarker group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 2629
Gene Symbol: GBA
GBA
0.020 Biomarker group BEFREE Glucosylceramide (GlcCer) is the primary storage lipid in the lysosomes of Gaucher patients and a secondary one in Niemann-Pick disease types A, B, and C. The regulatory roles of lipids on the hydrolysis of membrane bound GlcCer by lysosomal β-glucocerebrosidase (GBA1) was probed using a detergent-free liposomal assay. 28126847 2017
Entrez Id: 2629
Gene Symbol: GBA
GBA
0.020 Biomarker group LHGDN Glucosylceramidase mass and subcellular localization are modulated by cholesterol in Niemann-Pick disease type C. 14757764 2004
Entrez Id: 2717
Gene Symbol: GLA
GLA
0.010 Biomarker group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 2761
Gene Symbol: GM2AP1
GM2AP1
0.010 Biomarker group BEFREE It also accumulates in Niemann-Pick disease types A and B with primary storage of SM and with cholesterol in type C. Reconstitution of GM2 catabolism with β-hexosaminidase A and GM2 activator protein (GM2AP) at uncharged liposomal surfaces carrying GM2 as substrate generated only a physiologically irrelevant catabolic rate, even at pH 4.2. 26175473 2015
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 Biomarker group BEFREE The initial observations implicating ASM in this process have come from studies using cells from patients with NPD or from ASM knockout (ASMKO) mice, where the genetic deficiency of this enzymatic activity has been shown to protect these cells and animals from stress-induced and developmental apoptosis. 18567738 2008
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 Biomarker group BEFREE To evaluate the feasibility of somatic gene therapy for the treatment of these disorders, retroviral-mediated gene transfer was used to introduce the full-length ASM cDNA into cultured fibroblasts from two unrelated type A NPD patients. 1565614 1992
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 GeneticVariation group BEFREE Transient expression of the fsL178, L261X, and M382I mutations in COS-1 cells demonstrated that these lesions did not produce catalytically active ASM, consistent with the severe neuronopathic Type A NPD phenotype. 1618760 1992
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 GeneticVariation group BEFREE The first is due to the deficient activity of the enzyme acid sphingomyelinase (ASM; "types A & B" NPD), and the second is due to defective function in cholesterol transport ("type C" NPD). 28164782 2017
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 GeneticVariation group BEFREE Of interest, the Arg----Leu substitution occurred in one of the ASM alleles from the two Ashkenazi Jewish NPD type B patients studied and in none of the ASM alleles of 15 non-Jewish type B patients. 2023926 1991
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 Biomarker group BEFREE ASM deficient lymphoblasts derived from patients with Niemann-Pick disease (NPD) fail to undergo apoptosis in response to external signals and Fas cross-linking. 11310411 2000
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 Biomarker group BEFREE The Niemann-Pick disease group is now divided into two distinct entities: (1) acid sphingomyelinase-deficient Niemann-Pick disease (ASM-deficient NPD) resulting from mutations in the SMPD1 gene and encompassing type A and type B as well as intermediate forms; (2) Niemann-Pick disease type C (NP-C) including also type D, resulting from mutations in either the NPC1 or the NPC2 gene. 23622394 2013
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 AlteredExpression group BEFREE ASM activity is deficient in the genetic disorder Types A and B Niemann-Pick disease (NPD). 19944693 2010
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 GeneticVariation group BEFREE Structural and functional analysis of the ASM p.Ala359Asp mutant that causes acid sphingomyelinase deficiency. 27659707 2016
Entrez Id: 283120
Gene Symbol: H19
H19
0.100 GeneticVariation group BEFREE Recently, a missense mutation in the ASM gene (designated R496L) was detected in more than 30% of the ASM alleles from Ashkenazi Jewish type A NPD patients. 1391960 1992
Entrez Id: 3308
Gene Symbol: HSPA4
HSPA4
0.010 Biomarker group BEFREE Importantly, treatment with recombinant Hsp70 effectively reverts the dramatic increase in lysosomal volume and decrease in lysosomal stability in cells from patients with Niemann-Pick disease, a genetic disorder associated with reduced acid sphingomyelinase activity. 20519957 2010
Entrez Id: 3425
Gene Symbol: IDUA
IDUA
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017
Entrez Id: 8972
Gene Symbol: MGAM
MGAM
0.010 AlteredExpression group BEFREE To test whether reduction in lysosomal enzymatic activity in PD is specific to GCase, we measured GCase, acid sphingomyelinase (deficient in Niemann-Pick disease types A and B), alpha galactosidase A (deficient in Fabry), acid alpha-glucosidase (deficient in Pompe) and galactosylceramidase (deficient in Krabbe) enzymatic activities in dried blood spots of PD patients (n = 648) and controls (n = 317) recruited from Columbia University. 29369793 2018
Entrez Id: 219972
Gene Symbol: MPEG1
MPEG1
0.010 Biomarker group BEFREE The incidences of Gaucher disease, MPS I, and Niemann-Pick disease were comparable with previously published estimates. 28728811 2017