Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE Duplications of the X-linked MECP2 gene are associated with moderate to severe intellectual disability, epilepsy, and neuropsychiatric illness in males, while triplications are associated with a more severe phenotype. 22883432 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE MeCP2 mutations have been linked to Rett syndrome, a neurodevelopmental disorder characterized by severe intellectual disability in females. 29694339 2018
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE MECP2/IRAK1 duplication at Xq28 is inherited as an X-linked recessive trait and male-specific disorder associated with severe intellectual disability. 28302064 2017
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE Duplication of the MECP2 region is a frequent cause of severe mental retardation and progressive neurological symptoms in males. 16080119 2005
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE Rett syndrome (RTT) is a pervasive neurodevelopmental disorder mainly caused by mutations in the X-linked MECP2 gene associated with severe intellectual disability, movement disorders, and autistic-like behaviors. 25708779 2015
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE Rett syndrome is an X-linked dominant neurodevelopmental disorder manifesting with severe intellectual disability in females caused by various mutations in the MECP2 gene. 28254244 2017
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE Duplications encompassing the MECP2 gene on the Xq28 region have been described in male patients with moderate to severe mental retardation, absent speech, neonatal hypotonia, progressive spasticity and/or ataxia, recurrent severe respiratory infections, gastrointestinal problems, mild facial dysmorphisms (midface hypoplasia, depressed nasal bridge, large ears) and epilepsy. 22578097 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE MECP2 mutations have subsequently been identified in patients with a variety of clinical syndromes ranging from mild learning disability in females to severe mental retardation, seizures, ataxia, and sometimes neonatal encephalopathy in males. 11262731 2001
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE However, the recent identification of mutations in the MECP2 gene in affected males indicates that screening of the MECP2 gene should be considered also in males with severe mental retardation (MR) in whom the most common forms of MR have been excluded. 11521215 2001
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.200 GeneticVariation disease BEFREE Xq28 duplications including MECP2 are a well-known cause of severe mental retardation in males with seizures, muscular hypotonia, progressive spasticity, poor speech and recurrent infections that often lead to early death. 21326285 2011
Entrez Id: 4208
Gene Symbol: MEF2C
MEF2C
0.180 GeneticVariation disease BEFREE Partial MEF2C deletion in a Cypriot patient with severe intellectual disability and a jugular fossa malformation: review of the literature. 25691421 2015
Entrez Id: 4208
Gene Symbol: MEF2C
MEF2C
0.180 GeneticVariation disease BEFREE We therefore performed mutational analysis in 362 patients with severe mental retardation and found two truncating and two missense de novo mutations in MEF2C, establishing defects in this transcription factor as a novel relatively frequent autosomal dominant cause of severe mental retardation accounting for as much as 1.1% of patients. 20513142 2010
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.180 GeneticVariation disease BEFREE Sequencing of the TCF4 transcription factor gene, which is contained in the deletion region, in 30 patients with significant phenotypic overlap revealed heterozygous stop, splice, and missense mutations in five further patients with severe mental retardation and remarkable facial resemblance. 17436255 2007
Entrez Id: 4208
Gene Symbol: MEF2C
MEF2C
0.180 GeneticVariation disease BEFREE 5q14.3 deletions spanning and flanking MEF2C as well as intragenic MEF2C mutations have recently been described as a cause of severe intellectual disability, epilepsy, and muscular hypotonia, with variable brain and other anomalies. 23824879 2013
Entrez Id: 4208
Gene Symbol: MEF2C
MEF2C
0.180 GeneticVariation disease BEFREE Severe intellectual disability with inability to speak and epilepsy are universal features in patients with MEF2C mutations, although mild cognitive and speech disorders have been reported to occur in patients with duplications. 27255693 2016
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.180 GeneticVariation disease BEFREE Haploinsufficiency of the gene encoding for transcription factor 4 (TCF4) was recently identified as the underlying cause of Pitt-Hopkins syndrome (PTHS), an underdiagnosed mental-retardation syndrome characterised by a distinct facial gestalt, breathing anomalies and severe mental retardation. 18728071 2008
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.180 GeneticVariation disease BEFREE TCF4 mutations also cause Pitt-Hopkins Syndrome, an autosomal-dominant neurodevelopmental disorder associated with severe mental retardation. 20421335 2010
Entrez Id: 6567
Gene Symbol: SLC16A2
SLC16A2
0.150 GeneticVariation disease BEFREE Recently, the monocarboxylate transporter 8 (MCT8) was identified as a thyroid hormone transporter, and MCT8 mutations have been associated with Allan-Herndon-Dudley syndrome, an X linked condition characterized by severe mental retardation, dysarthria, athetoid movements, muscle hypoplasia, and spastic paraplegia. 17899191 2008
Entrez Id: 6567
Gene Symbol: SLC16A2
SLC16A2
0.150 GeneticVariation disease BEFREE Our results show the difficulty of distinguishing AHDS from patients with X-linked intellectual disability solely on the basis of clinical features and biochemical tests, and we advise screening for MCT8 mutations in either young or older patients with severe intellectual disability, axial hypotonia/dystonia, poor head control, spastic paraplegia, and athetoid movements even when they have normal thyroid hormone profiles. 23419639 2013
Entrez Id: 6567
Gene Symbol: SLC16A2
SLC16A2
0.150 GeneticVariation disease BEFREE We report a novel 1 bp deletion (c.1834delC) in the MCT8 gene in a large Brazilian family with Allan-Herndon-Dudley syndrome (AHDS), an X linked condition characterised by severe mental retardation and neurological dysfunction. 15980113 2006
Entrez Id: 2290
Gene Symbol: FOXG1
FOXG1
0.140 GeneticVariation disease BEFREE Haploinsufficiency of novel FOXG1B variants in a patient with severe mental retardation, brain malformations and microcephaly. 16133170 2005
Entrez Id: 2290
Gene Symbol: FOXG1
FOXG1
0.140 GeneticVariation disease CLINVAR
Entrez Id: 2290
Gene Symbol: FOXG1
FOXG1
0.140 GeneticVariation disease BEFREE FOXG1-related disorders, caused by deletions, intragenic mutations or duplications, are usually associated with severe intellectual disability, autistic features, and, in 87% of subjects, epileptiform manifestations. 30639390 2019
Entrez Id: 9378
Gene Symbol: NRXN1
NRXN1
0.130 GeneticVariation disease BEFREE Assessment of the clinical details in 25 previously undescribed individuals with NRXN1 exonic deletions demonstrated recurrent phenotypic features consisting of moderate to severe intellectual disability (91%), severe language delay (81%), autism spectrum disorder (65%), seizures (43%), and hypotonia (38%). 23533028 2013
Entrez Id: 1756
Gene Symbol: DMD
DMD
0.130 GeneticVariation disease BEFREE Severe mental retardation in a young boy with an in-frame deletion in the dystrophin gene. 7957365 1994