Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.310 Biomarker disease CTD_human A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors. 24974848 2014
Entrez Id: 1540
Gene Symbol: CYLD
CYLD
0.300 Biomarker disease CTD_human A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors. 24974848 2014
Entrez Id: 55193
Gene Symbol: PBRM1
PBRM1
0.300 Biomarker disease CTD_human A specific missense mutation in GTF2I occurs at high frequency in thymic epithelial tumors. 24974848 2014
Entrez Id: 79073
Gene Symbol: TMEM109
TMEM109
0.010 Biomarker disease BEFREE A total of 58 thymoma patients with MG (23 GMG and 35 OMG) and 73 thymoma patients without MG were analyzed using immunohistochemistry for CD4, CD25, Foxp3 and CXCL13. 22000402 2012
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 AlteredExpression disease LHGDN Absence of gene mutations in KIT-positive thymic epithelial tumors. 18486988 2008
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 CausalMutation disease CLINVAR Acquired resistance to imatinib in gastrointestinal stromal tumor occurs through secondary gene mutation. 15930355 2005
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 CausalMutation disease CLINVAR Activating c-KIT mutations in a subset of thymic carcinoma and response to different c-KIT inhibitors. 22357254 2012
Entrez Id: 54210
Gene Symbol: TREM1
TREM1
0.010 AlteredExpression disease BEFREE Activation of TREM-1 protected monocytic cells from apoptosis through activation of both extracellular signal-regulated kinase and v-akt murine thymoma viral oncogene homologue pathways and increased expression of myeloid cell leukemia-1 protein. 23364598 2013
Entrez Id: 4170
Gene Symbol: MCL1
MCL1
0.010 AlteredExpression disease BEFREE Activation of TREM-1 protected monocytic cells from apoptosis through activation of both extracellular signal-regulated kinase and v-akt murine thymoma viral oncogene homologue pathways and increased expression of myeloid cell leukemia-1 protein. 23364598 2013
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.010 Biomarker disease LHGDN All thymomas (including thymic carcinomas) were positive for p63 regardless of type. 17276940 2007
Entrez Id: 1515
Gene Symbol: CTSV
CTSV
0.010 AlteredExpression disease BEFREE Almost all cases (59/60) of thymoma expressed CTV, whereas 28 of 60 cases of thymoma expressed CTS. 27771373 2017
Entrez Id: 9423
Gene Symbol: NTN1
NTN1
0.020 Biomarker disease BEFREE Among patients with neuromyotonia and/or myasthenia gravis, the presence of Netrin-1 receptor or Caspr2 antibodies predicted thymoma (<i>p</i> < 0.05). 28251919 2017
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.040 Biomarker disease BEFREE Among patients with neuromyotonia and/or myasthenia gravis, the presence of Netrin-1 receptor or Caspr2 antibodies predicted thymoma (<i>p</i> < 0.05). 28251919 2017
Entrez Id: 1630
Gene Symbol: DCC
DCC
0.010 Biomarker disease BEFREE Antibodies against Netrin-1 receptors (DCC and UNC5a) and Caspr2 often coexist and associate with thymoma in patients with neuromyotonia and myasthenia gravis. 28251919 2017
Entrez Id: 90249
Gene Symbol: UNC5A
UNC5A
0.010 Biomarker disease BEFREE Antibodies against Netrin-1 receptors (DCC and UNC5a) and Caspr2 often coexist and associate with thymoma in patients with neuromyotonia and myasthenia gravis. 28251919 2017
Entrez Id: 7273
Gene Symbol: TTN
TTN
0.050 Biomarker disease BEFREE Antibodies to titin were found in sera from 85.7% of MG patients with thymoma (all age groups) and in 58% of nonthymomatous MG with late onset and acetylcholine receptor antibodies. 14592910 2003
Entrez Id: 10570
Gene Symbol: DPYSL4
DPYSL4
0.010 Biomarker disease BEFREE Antibodies to CRMP3-4 associated with limbic encephalitis and thymoma. 17403058 2007
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 Biomarker disease BEFREE Apart from their different morphology, TC and thymomas differ also in functional terms (TC, in contrast to thymomas, have lost the capacity to promote the maturation of intratumorous lymphocytes), have different genetic features (discussed in this review), a different immunoprofile (most TC overexpress c-KIT, whereas thymomas are consistently negative), and different clinical features (TC, in contrast to thymomas, are not associated with paraneoplastic myasthenia gravis). 20859121 2010
Entrez Id: 7818
Gene Symbol: DAP3
DAP3
0.010 AlteredExpression disease BEFREE Arg and DAP3 expression was correlated with human thymoma stage. 15679048 2004
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.010 Biomarker disease BEFREE Association of HLA-A in autoimmune myasthenia gravis with thymoma. 19278738 2009
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.170 CausalMutation disease CLINVAR Association of KIT exon 9 mutations with nongastric primary site and aggressive behavior: KIT mutation analysis and clinical correlates of 120 gastrointestinal stromal tumors. 12960119 2003
Entrez Id: 26191
Gene Symbol: PTPN22
PTPN22
0.030 GeneticVariation disease LHGDN Association of the PTPN22*R620W polymorphism with autoimmune myasthenia gravis. 16437561 2006
Entrez Id: 51435
Gene Symbol: SCARA3
SCARA3
0.010 AlteredExpression disease BEFREE At quantitative assessment, both the radiodensity and CSR were significantly higher for thymoma compared with nonthymoma groups (<i>P</i> < .001). 31331197 2020
Entrez Id: 10934
Gene Symbol: MORF4
MORF4
0.010 AlteredExpression disease BEFREE At quantitative assessment, both the radiodensity and CSR were significantly higher for thymoma compared with nonthymoma groups (<i>P</i> < .001). 31331197 2020
Entrez Id: 2017
Gene Symbol: CTTN
CTTN
0.010 Biomarker disease BEFREE Autoantibodies against intracellular targets, namely cortactin, titin, and ryanodine receptor (the latter two being associated with the presence of thymoma), may also be helpful as biomarkers in some patients. 29377162 2018