Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.600 SusceptibilityMutation disease ORPHANET
Entrez Id: 3329
Gene Symbol: HSPD1
HSPD1
0.100 Biomarker disease BEFREE We used two PCR reactions: in the first the complex-specific insertion sequence IS986/IS6110 was used to specifically detect DNA from Mycobacterium tuberculosis complex bacteria; in the second, conserved sequences of the mycobacterial groEL gene were used to detect DNA from mycobacteria other than M tuberculosis. 1349051 1992
Entrez Id: 6299
Gene Symbol: SALL1
SALL1
0.010 Biomarker disease BEFREE A Sal I-Hin dIII restriction fragment from Mycobacterium tuberculosis was found to hybridize specifically with genomic DNA from M. tuberculosis. 1383698 1992
Entrez Id: 4069
Gene Symbol: LYZ
LYZ
0.030 Biomarker disease BEFREE We conclude that DNA amplification in combination with lysozyme lysis can be used routinely in clinical laboratories as a rapid and sensitive test for the diagnosis of tuberculosis. 1515757 1992
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.080 Biomarker disease BEFREE Cytofluorometric analysis of the expressed gamma delta TCR repertoire of M. tuberculosis expanded cells was performed using anti-V region antibodies. 1658146 1991
Entrez Id: 3329
Gene Symbol: HSPD1
HSPD1
0.100 Biomarker disease BEFREE To further study this aspect, we stimulated T cells from normal human blood donors with synthetic peptides (each of approximately 15 amino acids in length) from the heat shock protein 65 of Mycobacterium tuberculosis-M. bovis. 1693134 1990
Entrez Id: 7303
Gene Symbol: TYS
TYS
0.030 Biomarker disease BEFREE Cytogenetic effects of 4 common anti-tubercular drugs, isoniazid (H), streptomycin (S), rifampicin (R) and pyrazinamide (Z), in 3 different combinations (2 SHRZ, 2 HRZ and 2 H2R2Z2) were evaluated in the lymphocytes of tuberculosis patients undergoing chemotherapy, in order to estimate their mutagenic potential in combination. 1988820 1991
Entrez Id: 56916
Gene Symbol: SMARCAD1
SMARCAD1
0.030 Biomarker disease BEFREE Cytogenetic effects of 4 common anti-tubercular drugs, isoniazid (H), streptomycin (S), rifampicin (R) and pyrazinamide (Z), in 3 different combinations (2 SHRZ, 2 HRZ and 2 H2R2Z2) were evaluated in the lymphocytes of tuberculosis patients undergoing chemotherapy, in order to estimate their mutagenic potential in combination. 1988820 1991
Entrez Id: 100
Gene Symbol: ADA
ADA
0.100 AlteredExpression disease BEFREE Non specific indicators of tuberculosis are generally unhelpful although the bromide partition test and assay of the enzyme adenosine deaminase in cerebrospinal fluid appear to be of value in the diagnosis of tuberculous meningitis. 2128831 1991
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.100 AlteredExpression disease BEFREE We studied monocytes from patients with tuberculosis and healthy skin test reactive controls for expression and function of IL 2 receptors (IL 2R). 2347912 1990
Entrez Id: 3329
Gene Symbol: HSPD1
HSPD1
0.100 Biomarker disease BEFREE We demonstrate here that human T cells from healthy individuals and disease sites are able to recognize determinants within the 65 kD protein that are either specific for M. tuberculosis or are conserved between GroEL of mycobacterial, E. coli or human origin. 2476144 1989
Entrez Id: 2638
Gene Symbol: GC
GC
0.080 Biomarker disease BEFREE Association between phosphoglucomutase (PGM1) and group-specific component (Gc) subtypes and tuberculosis. 6224013 1983
Entrez Id: 5236
Gene Symbol: PGM1
PGM1
0.020 Biomarker disease BEFREE For the Gc system, the phenotypic frequencies did not differ significantly, but the PGM1 system showed a significant difference in the tuberculosis patients compared to controls. 6224013 1983
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.100 GeneticVariation disease BEFREE Such genes include the murine MHC class I gene, Ld (toxoplasmosis), HLA-BW53, HLA DRB1* 1302-DQ B10s01 and TNF2 (malaria), murine Nramp (toxoplasmosis, leishmaniasis and tuberculosis), gene(s) modulating the T-helper type 1 and type 2 dichotomy (leishmaniasis, leprosy and HIV infection) and the natural killer cell complex (cytomegalovirus infection). 7495519 1995
Entrez Id: 3596
Gene Symbol: IL13
IL13
0.060 AlteredExpression disease BEFREE Compared with healthy tuberculin reactors, Mycobacterium tuberculosis-stimulated peripheral blood mononuclear cells from tuberculosis patients had diminished production and mRNA expression of the Th1 cytokines gamma interferon and interleukin 2 (IL-2), with no change in production and mRNA expression for the Th2 cytokines IL-4, IL-10, and IL-13. 7622255 1995
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.100 Biomarker disease BEFREE When AMPLICOR MTB results were compared with resolved results, i.e., a specimen grew M. tuberculosis or was obtained from a patient with a clinical diagnosis of tuberculosis, the sensitivity, specificity, positive predictive value, and negative predictive value for the AMPLICOR MTB test were 66.7, 99.6, 91.7, and 97.7%, respectively. 7665654 1995
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.100 Biomarker disease BEFREE When AMPLICOR MTB results were compared with resolved results, i.e., a specimen grew M. tuberculosis or was obtained from a patient with a clinical diagnosis of tuberculosis, the sensitivity, specificity, positive predictive value, and negative predictive value for the AMPLICOR MTB test were 66.7, 99.6, 91.7, and 97.7%, respectively. 7665654 1995
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.100 Biomarker disease BEFREE We developed an algorithm that can be used to make an initial choice of a probe (either Mycobacterium tuberculosis complex [MTB] or M. avium complex [MAC]) for use in testing respiratory specimens. 7665676 1995
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.100 Biomarker disease BEFREE We developed an algorithm that can be used to make an initial choice of a probe (either Mycobacterium tuberculosis complex [MTB] or M. avium complex [MAC]) for use in testing respiratory specimens. 7665676 1995
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 Biomarker disease BEFREE The granulomatous immune response in tuberculosis is characterized by delayed hypersensitivity and is mediated by various cytokines released by the stimulated mononuclear phagocytes, including tumor necrosis factor-alpha (TNF alpha) and IL-1 beta. 7683696 1993
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 AlteredExpression disease BEFREE M. tuberculosis and its components upregulated IL-1 beta and TNF alpha mRNAs in THP-1 cells. 7683696 1993
Entrez Id: 929
Gene Symbol: CD14
CD14
0.100 Biomarker disease BEFREE M. tuberculosis cell wall component LAM acts similarly to LPS in activating mononuclear phagocyte cytokine TNF alpha and IL-1 beta release through CD14 and synthesis at the transcriptional level; both cytokines are key participants in the host immune response to tuberculosis. 7683696 1993
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 AlteredExpression disease BEFREE We demonstrated that the Mycobacterium tuberculosis cell wall component lipoarabinomannan (LAM) is a very potent inducer of IL-1 beta gene expression in human monocytes and investigated the mechanism of this effect. 7684503 1993
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.600 GeneticVariation disease BEFREE This finding, together with the emerging information on almost total sequence homology between the murine and human Nramp genes suggests that this gene may be responsible for the phenotype of resistance or susceptibility to tuberculosis. 7713559 1994
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.600 Biomarker disease BEFREE These molecular markers will be useful to assess the role of NRAMP1 is susceptibility to tuberculosis and other macrophage-mediated diseases. 7717395 1995