Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 54509
Gene Symbol: RHOF
RHOF
0.100 Biomarker disease BEFREE Xpert(®) MTB/RIF for detection of Mycobacterium tuberculosis from frozen string and induced sputum sediments. 27393548 2016
Entrez Id: 80196
Gene Symbol: RNF34
RNF34
0.100 Biomarker disease BEFREE Xpert(®) MTB/RIF for detection of Mycobacterium tuberculosis from frozen string and induced sputum sediments. 27393548 2016
Entrez Id: 54509
Gene Symbol: RHOF
RHOF
0.100 Biomarker disease BEFREE Xpert<sup>®</sup> MTB/RIF associated with improved treatment initiation among patients with smear-negative tuberculosis. 30606320 2018
Entrez Id: 80196
Gene Symbol: RNF34
RNF34
0.100 Biomarker disease BEFREE Xpert<sup>®</sup> MTB/RIF associated with improved treatment initiation among patients with smear-negative tuberculosis. 30606320 2018
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.100 Biomarker disease BEFREE Xpert<sup>®</sup> MTB/RIF associated with improved treatment initiation among patients with smear-negative tuberculosis. 30606320 2018
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.100 Biomarker disease BEFREE Xpert<sup>®</sup> MTB/RIF associated with improved treatment initiation among patients with smear-negative tuberculosis. 30606320 2018
Entrez Id: 54509
Gene Symbol: RHOF
RHOF
0.100 Biomarker disease BEFREE Xpert MTB/RIF (Xpert) is the preferred first-line test for all persons with tuberculosis (TB) symptoms in South Africa in line with a diagnostic algorithm. 29208074 2018
Entrez Id: 80196
Gene Symbol: RNF34
RNF34
0.100 Biomarker disease BEFREE Xpert MTB/RIF (Xpert) is the preferred first-line test for all persons with tuberculosis (TB) symptoms in South Africa in line with a diagnostic algorithm. 29208074 2018
Entrez Id: 80196
Gene Symbol: RNF34
RNF34
0.100 Biomarker disease BEFREE Xpert MTB/RIF-confirmed rifampin-susceptible tuberculosis cases were recruited at tuberculosis diagnosis and followed up at 2 and 5 to 6 months. 28249999 2017
Entrez Id: 54509
Gene Symbol: RHOF
RHOF
0.100 Biomarker disease BEFREE Xpert MTB/RIF-confirmed rifampin-susceptible tuberculosis cases were recruited at tuberculosis diagnosis and followed up at 2 and 5 to 6 months. 28249999 2017
Entrez Id: 54509
Gene Symbol: RHOF
RHOF
0.100 Biomarker disease BEFREE Xpert MTB/RIF quantitation offers a new, standardized approach to measuring bacterial burden in the sputum of patients with tuberculosis. 21836139 2011
Entrez Id: 80196
Gene Symbol: RNF34
RNF34
0.100 Biomarker disease BEFREE Xpert MTB/RIF quantitation offers a new, standardized approach to measuring bacterial burden in the sputum of patients with tuberculosis. 21836139 2011
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.100 Biomarker disease BEFREE Xpert MTB/RIF was similar to other NATs (TaqMan MTB and TRCRapid M.TB) in terms of performance. 27919693 2017
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.100 Biomarker disease BEFREE Xpert MTB/RIF was similar to other NATs (TaqMan MTB and TRCRapid M.TB) in terms of performance. 27919693 2017
Entrez Id: 51520
Gene Symbol: LARS1
LARS1
0.030 AlteredExpression disease BEFREE X-ray crystallography was used to guide the design of LeuRS inhibitors that have good biochemical potency and excellent whole-cell activity against M. tuberculosis Importantly, their good oral bioavailability translates into in vivo efficacy in both the acute and chronic mouse models of TB with potency comparable to that of the frontline drug isoniazid. 27503647 2016
Entrez Id: 54892
Gene Symbol: NCAPG2
NCAPG2
0.100 Biomarker disease BEFREE World Health Organization (WHO) recommended Lateral Flow urine LipoArabinoMannan assay (LF-LAM) in immunocompromised patients; in 2010 WHO endorsed the use of Xpert Mycobacterium Tuberculosis/Rifampicin (MTB/RIF) test for rapid TB diagnosis but the assay is not used as screening test in all HIV+ patients irrespectively of symptoms due to cost and logistical barriers. 30024890 2018
Entrez Id: 4498
Gene Symbol: MT1JP
MT1JP
0.100 Biomarker disease BEFREE World Health Organization (WHO) recommended Lateral Flow urine LipoArabinoMannan assay (LF-LAM) in immunocompromised patients; in 2010 WHO endorsed the use of Xpert Mycobacterium Tuberculosis/Rifampicin (MTB/RIF) test for rapid TB diagnosis but the assay is not used as screening test in all HIV+ patients irrespectively of symptoms due to cost and logistical barriers. 30024890 2018
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 Biomarker disease BEFREE Within the cohort of HIV-positive subjects, the expression profiles of 7 genes at baseline (FCGR1A, RAB24, TLR1, TLR4, MMP9, NLRC4, and IL1B) could accurately discriminate between active tuberculosis and both latent and no M. tuberculosis infection, largely independently of (in)eligibility for highly active antiretroviral therapy (HAART). 29982697 2018
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.100 AlteredExpression disease BEFREE Within the TB-DM group, those known to be diabetic before incident TB (KDM) exhibited significantly higher levels of MMP-1, - 2, - 10 and - 12 at baseline and of MMP-1 and -3 post-treatment compared to those newly diagnosed with DM (NDM). 30045688 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Within 1 year after the initiation of TNF inhibitor treatment, 1 patient in the LTBI group (1/84; 1.2%) and 7 patients in the non-LTBI group (7/656; 1.1%) developed active tuberculosis. 30450023 2018
Entrez Id: 80196
Gene Symbol: RNF34
RNF34
0.100 Biomarker disease BEFREE With the current availability of point-of-care nucleic acid amplification platforms (eg, Xpert Edge), these data inform much needed investment and resource allocation strategies in tuberculosis endemic settings. 31097281 2019
Entrez Id: 54509
Gene Symbol: RHOF
RHOF
0.100 Biomarker disease BEFREE With the current availability of point-of-care nucleic acid amplification platforms (eg, Xpert Edge), these data inform much needed investment and resource allocation strategies in tuberculosis endemic settings. 31097281 2019
Entrez Id: 847
Gene Symbol: CAT
CAT
0.100 GeneticVariation disease BEFREE Wild-type catalase peroxidase vs G279D mutant type: Molecular basis of Isoniazid drug resistance in Mycobacterium tuberculosis. 29066301 2018
Entrez Id: 10479
Gene Symbol: SLC9A6
SLC9A6
0.020 Biomarker disease BEFREE Whole Genome Sequencing (WGS) is emerging as a very powerful tool for the management, outbreak analyses, surveillance and determining drug resistance of human infectious pathogens including Mycobacterium tuberculosis and MRSA. 25586521 2015
Entrez Id: 406934
Gene Symbol: MIR142
MIR142
0.010 Biomarker disease BEFREE Whole blood miRNA candidate analyses verified decreased expression of miR-26a, miR-29a, and miR-142-3p in children with tuberculosis as compared to healthy children with LTBI. 23613882 2013