Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23600
Gene Symbol: AMACR
AMACR
0.010 Biomarker disease BEFREE α-Methylacyl-coenzyme A racemase (AMACR, p504s) is a marker to distinguish malignant melanomas from dysplastic nevi and melanocytic nevi. 25149154 2014
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 GeneticVariation disease BEFREE The ApoE epsilon4 allele frequency (29.5%) was significantly higher in the AD patients than in the nAD patients (17.1%) or in the control groups (9.5%). 18555606 2008
Entrez Id: 358
Gene Symbol: AQP1
AQP1
0.010 Biomarker disease BEFREE Tumoral melanocytes in atypical nevi and melanomas were negative for AQP1. 31305898 2019
Entrez Id: 367
Gene Symbol: AR
AR
0.010 AlteredExpression disease BEFREE We have found downmodulated AR expression in dermal fibroblasts underlying premalignant skin cancer lesions (actinic keratoses and dysplastic nevi) as well as in CAFs from the 3 major skin cancer types, squamous cell carcinomas (SCCs), basal cell carcinomas, and melanomas. 30395538 2018
Entrez Id: 405
Gene Symbol: ARNT
ARNT
0.010 Biomarker disease BEFREE A small reduction of TANGO was also seen in different benign and atypical nevi when compared to normal skin. 17044017 2006
Entrez Id: 27113
Gene Symbol: BBC3
BBC3
0.010 AlteredExpression disease BEFREE Here we report that PUMA expression is significantly weaker in primary melanomas compared to dysplastic nevi (P<0.0001), and is further reduced in metastatic melanomas compared to primary tumors (P=0.001). 15690057 2005
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 AlteredExpression disease BEFREE We examined 13 congenital, 11 acquired, and six atypical or dysplastic nevi for expression of bcl-2. 7632063 1995
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE The T1796A single point mutation in exon 15 of the BRAF gene has recently been reported in a high percentage of malignant melanomas and benign melanocytic lesions such as congenital nevi, compound nevi, intradermal nevi and dysplastic nevi. 14984580 2004
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE Extended BRAF testing for 9 mutations in 125 dysplastic nevi from 101 patients, derived from populations with differing potential UV radiation exposure rates (Lebanon and Saudi Arabia), was performed. 23906414 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE In addition, we found that there was no association between the BRAF genotype and mean total number of banal or atypical nevi in either the cases or controls. 15824163 2005
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE However, comparing only atypical nevi and melanoma lesions the frequency of BRAF mutation is significantly greater in male (78%) than female (35%) patients (P = 0.0194). 14501284 2003
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE Dermoscopy-targeted sampling and genotyping of a melanoma in situ arising in a dysplastic nevus revealed a phenotype-genotype paradox that confounds the exclusive significance of BRAF and NRAS mutations in melanoma pathogenesis. 25607474 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 Biomarker disease BEFREE The disparate expression of IGFBP7 in BRAFV600E-positive dysplastic nevi (enhanced in 56% and diminished/absent in 44%) indicates that the behavior of oncogenic BRAF in dysplastic nevi, unlike that in malignant melanoma, does not appear to consistently induce senescence/apoptosis through pathways mediated by IGFBP7. 20233623 2010
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE Five of the 10 Spitz nevi with BRAF mutations were altered by more than usual cytologic atypia and/or architectural atypia overlapping with dysplastic nevi, or irritation/inflammation; one desmoplastic Spitz nevus had a BRAF mutation. 16799476 2006
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.010 Biomarker disease BEFREE Novel deletion loci at 5q35 and 17q21 (BRCA1) in atypical nevi and melanomas were identified. 19461239 2009
Entrez Id: 25855
Gene Symbol: BRMS1
BRMS1
0.010 AlteredExpression disease BEFREE We found that BRMS1 expression was significantly decreased in metastatic melanoma compared with primary melanoma or dysplastic nevi (P=0.021 and 0.001, respectively, χ(2) test). 20935672 2011
Entrez Id: 23705
Gene Symbol: CADM1
CADM1
0.010 AlteredExpression disease BEFREE No significant changes in TSLC1 mRNA and protein expressions were found between normal skin and dysplastic nevi. 23047161 2012
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 AlteredExpression disease BEFREE Statistically significant differences in cyclin D1 expression were observed between melanomas and common nevi as well as between dysplastic and common nevi (p = 0.0001), but not between melanomas and dysplastic nevi. 20496072 2010
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 AlteredExpression disease BEFREE The aim of this study is to investigate cyclin D1 expression and Ki67 proliferative index in a group of melanocytic lesions to address the biologic significance of sporadic dysplastic nevi in the progression of melanocytic lesions. 17525627 2007
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 Biomarker disease BEFREE Cyclin D1 overexpression also correlated with cytologic atypia, as dysplastic nevi with moderate or severe cytologic atypia contained a greater percentage of cyclin D1-positive cells than did nevi with mild atypia. 11175636 2001
Entrez Id: 896
Gene Symbol: CCND3
CCND3
0.010 AlteredExpression disease BEFREE In histopathologically ambiguous cases, lower cyclin D3 expression in dysplastic nevi can be a diagnostic marker for that lesion type. 20496072 2010
Entrez Id: 911
Gene Symbol: CD1C
CD1C
0.010 Biomarker disease BEFREE Melanomas and Dysplastic Nevi Differ in Epidermal CD1c+ Dendritic Cell Count. 28331853 2017
Entrez Id: 3732
Gene Symbol: CD82
CD82
0.020 AlteredExpression disease BEFREE In fact, KAI1 expression is drastically reduced in primary melanoma compared with dysplastic nevi (P = 1.8×10(-4)) and further reduced in metastatic melanoma compared with primary melanoma (P = 9.4 × 10(-15)). 24130172 2014
Entrez Id: 3732
Gene Symbol: CD82
CD82
0.020 AlteredExpression disease BEFREE CD44v8-10 and U2AF2 expression levels, which are negatively correlated with CD82 levels, are markedly elevated in primary melanoma compared with dysplastic nevi and further increased in metastatic melanoma. 27041584 2016
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.120 Biomarker disease HPO