Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 Biomarker disease BEFREE The disparate expression of IGFBP7 in BRAFV600E-positive dysplastic nevi (enhanced in 56% and diminished/absent in 44%) indicates that the behavior of oncogenic BRAF in dysplastic nevi, unlike that in malignant melanoma, does not appear to consistently induce senescence/apoptosis through pathways mediated by IGFBP7. 20233623 2010
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE Five of the 10 Spitz nevi with BRAF mutations were altered by more than usual cytologic atypia and/or architectural atypia overlapping with dysplastic nevi, or irritation/inflammation; one desmoplastic Spitz nevus had a BRAF mutation. 16799476 2006
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE In addition, we found that there was no association between the BRAF genotype and mean total number of banal or atypical nevi in either the cases or controls. 15824163 2005
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE The T1796A single point mutation in exon 15 of the BRAF gene has recently been reported in a high percentage of malignant melanomas and benign melanocytic lesions such as congenital nevi, compound nevi, intradermal nevi and dysplastic nevi. 14984580 2004
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.070 GeneticVariation disease BEFREE However, comparing only atypical nevi and melanoma lesions the frequency of BRAF mutation is significantly greater in male (78%) than female (35%) patients (P = 0.0194). 14501284 2003
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.040 GeneticVariation disease BEFREE One of the two cases lacking BRAF and NRAS mutations was a dysplastic naevus harbouring an HRAS Q61L hotspot mutation. 30791119 2019
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.040 AlteredExpression disease BEFREE To analyze <i>BRAF</i><sup>V600E</sup>, p16 expression and melanocyte proliferation in dermal, compound and dysplastic nevi, cells of primary and metastatic melanoma in the Polish population. 29507566 2017
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.040 GeneticVariation disease BEFREE Dermoscopy-targeted sampling and genotyping of a melanoma in situ arising in a dysplastic nevus revealed a phenotype-genotype paradox that confounds the exclusive significance of BRAF and NRAS mutations in melanoma pathogenesis. 25607474 2015
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.040 Biomarker disease BEFREE Given the putative neoplastic potential of dysplastic nevi, our aim was to ascertain in dysplastic nevi from intermittently sun-exposed skin and of varying severity the frequency of oncogenic BRAF and NRAS and to assess expression of IGFBP7 in the same. 20233623 2010
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.040 GeneticVariation disease BEFREE We conclude that the homozygous p16 deletion is not sufficient for the development of a dysplastic naevus phenotype and melanoma. 12690301 2003
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.040 GeneticVariation disease BEFREE We investigated the occurrence of NRAS mutations in melanomas and dysplastic nevi in individuals with germline CDKN2A mutations. 12783933 2003
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.040 GeneticVariation disease BEFREE Homozygous deletion of p16 was found in 29% (4/14) of dysplastic nevi but never in benign nevi. 12296515 2002
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.040 GeneticVariation disease BEFREE Therefore, these data suggest that deletion of p16 may play an important role in the development of dysplastic nevus as an early event and that the changes may represent an early event in the development of malignant melanoma. 9490270 1998
Entrez Id: 4157
Gene Symbol: MC1R
MC1R
0.030 GeneticVariation disease BEFREE Increased BCC risk persisted in the presence of 2 or more MC1R variants (OR:4.15, 95% CI:1.35-12.72), after adjustment for potential confounding factors including skin color (P:0.237) and atypical nevi (OR:9.57, 95% CI:2.19-41.81, P:0.003). 25809071 2015
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 AlteredExpression disease BEFREE Statistically significant differences in cyclin D1 expression were observed between melanomas and common nevi as well as between dysplastic and common nevi (p = 0.0001), but not between melanomas and dysplastic nevi. 20496072 2010
Entrez Id: 4157
Gene Symbol: MC1R
MC1R
0.030 Biomarker disease BEFREE Altogether, the factors modifying significantly the melanoma risk associated with CDKN2A mutations (stepwise procedure) were: MC1R and dysplastic nevi (increasing the risk) and GSTT1 (decreasing the risk). 19484507 2009
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 AlteredExpression disease BEFREE The aim of this study is to investigate cyclin D1 expression and Ki67 proliferative index in a group of melanocytic lesions to address the biologic significance of sporadic dysplastic nevi in the progression of melanocytic lesions. 17525627 2007
Entrez Id: 4157
Gene Symbol: MC1R
MC1R
0.030 GeneticVariation disease BEFREE Our goal was to examine the joint effects of MC1R variants and other potential risk factors [total nevi, dysplastic nevi, pigmentary traits (skin, hair and eye color), skin reactions to sunlight, and degree of sun exposure] on CDKN2A penetrance. 16214921 2005
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 Biomarker disease BEFREE Cyclin D1 overexpression also correlated with cytologic atypia, as dysplastic nevi with moderate or severe cytologic atypia contained a greater percentage of cyclin D1-positive cells than did nevi with mild atypia. 11175636 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease BEFREE All three dysplastic nevi with LOH for p53 also showed LOH at p16. 9490270 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation disease BEFREE Genetic alterations of p16INK4a and p53 genes in sporadic dysplastic nevus. 9299424 1997
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 AlteredExpression disease BEFREE Expression of the p53 protein was not observed in any of the benign or dysplastic nevi. 8485708 1993
Entrez Id: 406993
Gene Symbol: MIR211
MIR211
0.020 AlteredExpression disease BEFREE Qualitatively, all dysplastic nevi expressed miR-211 at high (86%) and low (14%) levels, independent of the degree of nuclear atypia. 26916074 2016
Entrez Id: 2919
Gene Symbol: CXCL1
CXCL1
0.020 AlteredExpression disease BEFREE The immune microenvironment of DNs was characterized by an increase of T helper type 1 (IFNγ) and T helper type 2 (IL13) cytokines as well as an upregulation of oncostatin M and CXCL1. 27377700 2016
Entrez Id: 3732
Gene Symbol: CD82
CD82
0.020 AlteredExpression disease BEFREE CD44v8-10 and U2AF2 expression levels, which are negatively correlated with CD82 levels, are markedly elevated in primary melanoma compared with dysplastic nevi and further increased in metastatic melanoma. 27041584 2016