Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5327
Gene Symbol: PLAT
PLAT
0.010 Biomarker disease BEFREE Northern blot analysis revealed RNA specific for u-PA and t-PA. Another large cell carcinoma-derived cell line, LCLC 103H, secreted smaller amounts of plasminogen activator and, additionally, plasminogen activator inhibitor. 2555056 1989
Entrez Id: 5894
Gene Symbol: RAF1
RAF1
0.010 Biomarker disease BEFREE BEAS-2B cells expressing both the transfected c-raf-1 and c-myc sequences formed large cell carcinomas in athymic nude mice with a latency of 4-21 weeks, whereas either pZip-raf- or pZip-myc-transfected cells were nontumorigenic after 12 months. 2557616 1989
Entrez Id: 6037
Gene Symbol: RNASE3
RNASE3
0.010 Biomarker disease BEFREE BEAS-2B cells expressing both the transfected c-raf-1 and c-myc sequences formed large cell carcinomas in athymic nude mice with a latency of 4-21 weeks, whereas either pZip-raf- or pZip-myc-transfected cells were nontumorigenic after 12 months. 2557616 1989
Entrez Id: 2335
Gene Symbol: FN1
FN1
0.020 AlteredExpression disease BEFREE Increased expression of the ED-B+ mRNA was associated with all types of lung cancer including adenocarcinoma, squamous cell carcinoma, small cell carcinoma, and large cell carcinoma. 2297755 1990
Entrez Id: 5173
Gene Symbol: PDYN
PDYN
0.010 GeneticVariation disease BEFREE Ten human cell lines, six small cell lung carcinoma (SCLC), one large cell carcinoma (LCC), two neuroblastoma and one lymphoblast-like cell line, were screened with a preprodynorphin cRNA-probe. 1681570 1991
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.010 GeneticVariation disease BEFREE K- or NRAS genes activated by point mutation at codons 12 or 61 were detected in a large cell carcinoma, a squamous cell carcinoma, and 5 adenocarcinomas. 1996309 1991
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 Biomarker disease BEFREE Functional and morphological effects of tumour necrosis factor alpha in an interleukin 6-producing pulmonary large cell carcinoma with sarcomatoid features. 8205350 1994
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 AlteredExpression disease BEFREE We examined the levels of expression of the multidrug resistance-associated protein (MRP) gene quantified by Northern blot analysis in comparison with those of the MDR1 gene determined by reverse transcription-polymerase chain reaction (RT-PCR) in 104 non-small-cell lung cancer (NSCLC) specimens [59 adenocarcinoma (Ad), 40 squamous cell carcinoma (Sq), four large cell carcinoma (La) and one adeno-squamous carcinoma (AdSq)]. 7669560 1995
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.010 AlteredExpression disease BEFREE We examined the levels of expression of the multidrug resistance-associated protein (MRP) gene quantified by Northern blot analysis in comparison with those of the MDR1 gene determined by reverse transcription-polymerase chain reaction (RT-PCR) in 104 non-small-cell lung cancer (NSCLC) specimens [59 adenocarcinoma (Ad), 40 squamous cell carcinoma (Sq), four large cell carcinoma (La) and one adeno-squamous carcinoma (AdSq)]. 7669560 1995
Entrez Id: 4585
Gene Symbol: MUC4
MUC4
0.010 AlteredExpression disease BEFREE Lung squamous-cell, adenosquamous, and large-cell carcinomas were characterized by increased levels of MUC4 mucin only. 8638091 1996
Entrez Id: 960
Gene Symbol: CD44
CD44
0.020 GeneticVariation disease BEFREE CD44 variant 6 expression was most frequently observed in squamous cell carcinoma (P = 0.00058); 15 (79%) of 19 squamous cell carcinoma cases were positive, as were five (22%) of 23 adenocarcinoma cases and two (67%) of three large cell carcinoma cases. 9316006 1997
Entrez Id: 6439
Gene Symbol: SFTPB
SFTPB
0.020 AlteredExpression disease BEFREE Squamous cell and large cell carcinomas of the lung and nonpulmonary adenocarcinomas did not contain pro-SP-B immunoreactivity or SP-B mRNA. 9021728 1997
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.010 AlteredExpression disease BEFREE Epithelial expression of matrilysin predominated in adenocarcinomas and large-cell carcinomas (P = 0.07). 9137088 1997
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE Males occupationally exposed to coal-derived substances showed a relatively high frequency of squamous and large-cell carcinomas, relatively frequent mutations in codon 298 of p53 and a low frequency of p53 immunohistochemically positive tumours. 10424749 1999
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.020 GeneticVariation disease BEFREE Compared with smoking referents, there was a significant over-representation of the GSTM1-null genotype among patients with squamous cell carcinoma (SQ) [odds ratio (OR) = 1.7, 95% confidence interval (95%CI) = 1.1-2.7], and the NAT2-slow genotype among patients with large cell carcinoma or mixed histological diagnosis (LM) (OR = 2.5, 95%CI = 1.0-6.1). 10607733 2000
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.010 AlteredExpression disease BEFREE RT-PCR assay revealed IL-10 mRNA expression in 68 (83%) of 82 NSCLC surgical specimens (40 of 50 adenocarcinomas, 22 of 26 squamous cell carcinomas, 5 of 5 large-cell carcinomas, 1 of 1 adenosquamous-cell carcinoma). 10997808 2000
Entrez Id: 10
Gene Symbol: NAT2
NAT2
0.010 GeneticVariation disease BEFREE Compared with smoking referents, there was a significant over-representation of the GSTM1-null genotype among patients with squamous cell carcinoma (SQ) [odds ratio (OR) = 1.7, 95% confidence interval (95%CI) = 1.1-2.7], and the NAT2-slow genotype among patients with large cell carcinoma or mixed histological diagnosis (LM) (OR = 2.5, 95%CI = 1.0-6.1). 10607733 2000
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE 20 of the 32 (69%) NSCLC patients contained mutant P53 in the yeast functional assay with the higher frequency in squamous cell carcinoma (14/17, 82%) than in adenocarcinoma (5/10, 50%) and large cell carcinoma (3/5, 60%) (p<0.01, chi2 test). 11374799 2001
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.010 AlteredExpression disease BEFREE In early-stage NSCLC (n = 70) expression of MeCP2 and MBD2 was significantly lower in squamous cell carcinoma than in adenocarcinoma or large cell carcinoma (P = 0.03 and P = 0.01). 11710831 2001
Entrez Id: 3135
Gene Symbol: HLA-G
HLA-G
0.010 AlteredExpression disease BEFREE Nine of 34 (26%) tumors were positive by immunohistochemistry using monoclonal antibody (mAb) 4H84, recognizing all denatured HLA-G isoforms, of which six were positive using mAb 16G1, recognizing soluble HLA-G. HLA-G immunoreactivity correlated with high-grade histology, with HLA-G being preferentially expressed on large-cell carcinomas. 11549573 2001
Entrez Id: 941
Gene Symbol: CD80
CD80
0.010 Biomarker disease BEFREE Five non-small cell lung cancer cell lines (two adenocarcinomas, 1 squamous cell carcinoma, 1 large cell carcinoma and 1 adenosquamous cell carcinoma) were established from surgical specimens and were successfully transduced with a plasmid constructed with expression vector pBj and human CD80 cDNA, using a lipofection method. 11267941 2001
Entrez Id: 8932
Gene Symbol: MBD2
MBD2
0.010 AlteredExpression disease BEFREE In early-stage NSCLC (n = 70) expression of MeCP2 and MBD2 was significantly lower in squamous cell carcinoma than in adenocarcinoma or large cell carcinoma (P = 0.03 and P = 0.01). 11710831 2001
Entrez Id: 6699
Gene Symbol: SPRR1B
SPRR1B
0.010 AlteredExpression disease BEFREE SPRR1B expression is either detectable or PMA (phorbol 13-myristate 12-acetate) -inducible in several malignant BE cells including squamous, adeno, small and large cell carcinomas. 11313996 2001
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.030 AlteredExpression disease LHGDN Evaluation of HER-2/neu gene amplification and protein expression in non-small cell lung carcinomas. 11986780 2002
Entrez Id: 7080
Gene Symbol: NKX2-1
NKX2-1
0.010 Biomarker disease BEFREE Thyroid transcription factor-1 was not detected in squamous cell carcinomas and large cell carcinomas. 12379752 2002