Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.200 CausalMutation disease CLINVAR
Entrez Id: 4763
Gene Symbol: NF1
NF1
0.100 GeneticVariation disease CLINVAR
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.020 GeneticVariation disease BEFREE In order to examine a possible correlation between these two genetic aberrations, the authors studied 106 gliomas (58 glioblastomas, 14 anaplastic astrocytomas, five astrocytomas, nine pilocytic astrocytomas, seven mixed gliomas, six oligodendrogliomas, two ependymomas, one subependymoma, one subependymal giant-cell astrocytoma, and three gangliogliomas) with Southern blot analysis for loss of heterozygosity on both arms of chromosome 10 and for amplification of the EGFR gene. 1320666 1992
Entrez Id: 174
Gene Symbol: AFP
AFP
0.010 Biomarker disease BEFREE Pineal ganglioglioma in a patient with familial basal ganglia calcification and elevated serum alpha-fetoprotein: case report. 7692346 1993
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.060 GeneticVariation disease BEFREE The rare allele of the TSC2 gene emerges as a candidate for a predisposing factor for the formation of sporadic gangliogliomas. 9210877 1997
Entrez Id: 367
Gene Symbol: AR
AR
0.020 PosttranslationalModification disease BEFREE In the present study, we investigated the clonality of eight gangliogliomas from female patients using both methylation- and transcription-based clonality assays at the androgen receptor locus (HUMARA) on the X chromosome. 9250169 1997
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.060 GeneticVariation disease BEFREE A polymorphism in the TSC2 gene has been found to be increased in gangliogliomas, a lesion which is associated with disturbed neuro-glial cell migration pattern. 9928911 1998
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.060 Biomarker disease BEFREE DNA sequence analysis of TSC1 and TSC2 was studied in 20 patients with gangliogliomas. 11437991 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 GeneticVariation disease BEFREE Findings demonstrate that the presence of TP53 mutation in progressed gangliogliomas should be interpreted as a progression-associated mutation rather than a consequence of treatment. 11453385 2001
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.020 GeneticVariation disease BEFREE DNA sequence analysis of TSC1 and TSC2 was studied in 20 patients with gangliogliomas. 11437991 2001
Entrez Id: 2903
Gene Symbol: GRIN2A
GRIN2A
0.010 GeneticVariation disease BEFREE We have examined the immunohistochemical expression of BDNF, full-length TrkB receptor and the NMDAR subunit 1 and subunit 2A/B proteins (NMDAR1 and NMDAR2A/B) in glioneuronal tumors (gangliogliomas, GG, n = 40; dysembryoplastic neuroepithelial tumors, DNT, n = 15), from patients with chronic intractable epilepsy. 11355310 2001
Entrez Id: 2902
Gene Symbol: GRIN1
GRIN1
0.010 GeneticVariation disease BEFREE We have examined the immunohistochemical expression of BDNF, full-length TrkB receptor and the NMDAR subunit 1 and subunit 2A/B proteins (NMDAR1 and NMDAR2A/B) in glioneuronal tumors (gangliogliomas, GG, n = 40; dysembryoplastic neuroepithelial tumors, DNT, n = 15), from patients with chronic intractable epilepsy. 11355310 2001
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.060 Biomarker disease BEFREE The reelin signaling and tuberin/insulin growth receptor pathways have recently been implicated in ganglioglioma development. 12125736 2002
Entrez Id: 947
Gene Symbol: CD34
CD34
0.050 Biomarker disease BEFREE Almost 80% of gangliogliomas reveal immunoreactivity for CD34, a stem cell epitope not expressed in normal brain. 12125736 2002
Entrez Id: 1641
Gene Symbol: DCX
DCX
0.030 AlteredExpression disease BEFREE For gene expression analysis of CDK5 and DCX, a quantitative real time reverse transcription-PCR TaqMan assay was used with mRNA from gangliogliomas ( n=22) and non-lesional central nervous tissue control tissue ( n=7). 12200628 2002
Entrez Id: 5649
Gene Symbol: RELN
RELN
0.020 Biomarker disease BEFREE Here, we have analyzed two major components of the reelin pathway associated with neuronal migration and cortical cytoarchitecture in gangliogliomas, i.e., cyclin-dependent kinase 5 (CDK5) and doublecortin (DCX). 12200628 2002
Entrez Id: 1020
Gene Symbol: CDK5
CDK5
0.010 AlteredExpression disease BEFREE For gene expression analysis of CDK5 and DCX, a quantitative real time reverse transcription-PCR TaqMan assay was used with mRNA from gangliogliomas ( n=22) and non-lesional central nervous tissue control tissue ( n=7). 12200628 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 GeneticVariation disease BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754 2003
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.030 AlteredExpression disease BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754 2003
Entrez Id: 9961
Gene Symbol: MVP
MVP
0.010 AlteredExpression disease BEFREE MVP expression was observed in the neuronal component of 30 of 30 GGs and in a population of tumor glial cells. 12919388 2003
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.010 AlteredExpression disease BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754 2003
Entrez Id: 9961
Gene Symbol: MVP
MVP
0.010 AlteredExpression disease LHGDN MVP expression was observed in the neuronal component of 30 of 30 GGs and in a population of tumor glial cells. 12919388 2003
Entrez Id: 947
Gene Symbol: CD34
CD34
0.050 Biomarker disease BEFREE We observed coexpression of CD34 and NFM, suggesting neuronal differentiation of the CD34 expressing cellular elements in gangliogliomas. 15311215 2004
Entrez Id: 5649
Gene Symbol: RELN
RELN
0.020 Biomarker disease BEFREE Here, we have analysed two major components of the reelin pathway involved in neuronal migration and cortical development, that is, p35 and disabled-1 (dab1), in gangliogliomas. 15175076 2004
Entrez Id: 105375355
Gene Symbol: UPK3B
UPK3B
0.010 AlteredExpression disease BEFREE Gene expression of dab1 and p35 was determined by real-time RT-PCR (reverse transcriptase polymerase chain reaction) in gangliogliomas (n = 14) vs. non-neoplastic central nervous system tissue (n = 20). 15175076 2004