Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.040 Biomarker disease BEFREE Gene expression experiments with LDL receptor lacking primary FH fibroblasts, revealed that SR-BI and ABCA1 are important regulators for cholesterol acquisition in FH cells, consistent with findings in cells from NPC and TD patients. 22425645 2012
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.040 AlteredExpression disease BEFREE These results indicate that the cholesterol trafficking defect in NPC disease results in reduced activity of ABCA1, which we suggest is responsible for the low HDL-cholesterol in the majority of NPC subjects and partially responsible for the overaccumulation of cellular lipids in this disorder. 12813037 2003
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.040 Biomarker disease BEFREE In this study, we found that when ABCA1 is defective (Tangier disease) there is secondary inhibition of the NPC disease pathway, linking these two diseases at the level of cellular pathophysiology. 31707734 2019
Entrez Id: 19
Gene Symbol: ABCA1
ABCA1
0.040 AlteredExpression disease BEFREE We previously reported that ABCA1 expression and HDL formation are impaired in the lysosomal cholesterol storage disorder Niemann-Pick disease type C1 and that plasma HDL-C is low in the majority of Niemann-Pick disease type C patients. 21757691 2011
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 Biomarker disease BEFREE P-glycoprotein levels varied significantly among the various fibroblasts tested, but no correlation with NPC phenotype or rate of progesterone metabolism was noted, and P-glycoprotein inhibitors did not affect conversion of progesterone to products. 10622400 2000
Entrez Id: 213
Gene Symbol: ALB
ALB
0.010 Biomarker disease BEFREE The Albumin-to-Alkaline Phosphatase Ratio (AAPR) has been recently revealed as a prognostic index for hepatocellular carcinoma, whereas its role in metastatic nasopharyngeal cancer (NPC) remains unclear. 28382143 2017
Entrez Id: 301
Gene Symbol: ANXA1
ANXA1
0.010 Biomarker disease BEFREE Here, we used genetic ablation of the p35 gene to examine the specific involvement of p35, p25, and hence cdk5 activation in NPC neuropathogenesis. 16525053 2006
Entrez Id: 309
Gene Symbol: ANXA6
ANXA6
0.010 Biomarker disease BEFREE We conclude that AnxA6 may participate in formation of cholesterol-rich platforms on LE and therefore may contribute to the pathology of the NPC disease. 19900398 2010
Entrez Id: 324
Gene Symbol: APC
APC
0.010 AlteredExpression disease BEFREE This study aimed to detect the effect of EBV on Wnt inhibitory factor 1 (WIF1), Nemo-like kinase (NLK), and adenomatous polyposis coli (APC) gene methylation, and expression in gastric carcinoma and NPC. 28543390 2017
Entrez Id: 200315
Gene Symbol: APOBEC3A
APOBEC3A
0.010 Biomarker disease BEFREE NPC exhibited APOBEC3A/B and nucleotide-excision-repair-related mutational signatures. 28857155 2018
Entrez Id: 100913187
Gene Symbol: APOBEC3A_B
APOBEC3A_B
0.010 Biomarker disease BEFREE NPC exhibited APOBEC3A/B and nucleotide-excision-repair-related mutational signatures. 28857155 2018
Entrez Id: 347
Gene Symbol: APOD
APOD
0.010 AlteredExpression disease BEFREE For instance, apoD is overexpressed in neural tissues in Niemann-Pick's type C disease, after acute CNS injury and cerebral ischemia, Alzheimer's disease and by a number of different tumors such as breast, prostate, ovarian and endometrial carcinomas. 12646752 2003
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker disease BEFREE Niemann-Pick type C disease: accelerated neurofibrillary tangle formation and amyloid beta deposition associated with apolipoprotein E epsilon 4 homozygosity. 12205649 2002
Entrez Id: 351
Gene Symbol: APP
APP
0.070 AlteredExpression disease BEFREE Increased CSF levels of Aβ(38), Aβ(40), and Aβ(42) and unaltered levels of β-cleaved soluble APP are consistent with increased γ-secretase-dependent Aβ release in the brains of patients with NPC. 21205675 2011
Entrez Id: 351
Gene Symbol: APP
APP
0.070 AlteredExpression disease BEFREE Here, NPC1 null cells (CHO-NPC1-/-), exhibiting increased cholesterol levels and disturbed cholesterol transport similar to that observed in Niemann-Pick type C disease (NPC), were used to analyze the influence of altered cholesterol levels on APP-BACE1 proximity. 23443094 2012
Entrez Id: 351
Gene Symbol: APP
APP
0.070 Biomarker disease BEFREE Collectively, our results reveal that overexpression of APP in Npc1-deficient mice can negatively influence longevity and a wide spectrum of behavioral/neuropathological abnormalities, thus raising the possibility that APP and NPC1 may interact functionally to regulate the development of AD and NPC pathologies. 22869680 2012
Entrez Id: 351
Gene Symbol: APP
APP
0.070 Biomarker disease BEFREE We carried out genome-wide comparative transcriptome analyses of pre-symptomatic Npc1<sup>+/+</sup>/App<sup>+/+</sup>, Npc1<sup>-/-</sup>/App<sup>+/+</sup>, Npc1<sup>+/+</sup>/App<sup>-/-</sup>, and Npc1<sup>-/-</sup>/App<sup>-/-</sup> mouse cerebella to identify biological pathways in the NPC brain further affected by the loss of APP. 31847862 2019
Entrez Id: 351
Gene Symbol: APP
APP
0.070 Biomarker disease BEFREE The pattern of Aβ peptides and sAPP-α/β fragments in cell media was differently affected by NPC-phenotype induced by U18666A treatment and by NPC1 ( -/- ) genotype. 22935999 2012
Entrez Id: 351
Gene Symbol: APP
APP
0.070 AlteredExpression disease BEFREE Recent studies have shown that NPC disease exhibits intriguing parallels with Alzheimer's disease, including the presence of neurofibrillary tangles and increased levels of amyloid precursor protein (APP)-derived β-amyloid (Aβ) peptides in vulnerable brain neurons. 23382922 2013
Entrez Id: 351
Gene Symbol: APP
APP
0.070 Biomarker disease BEFREE Our results support that cholesterol overload, such as in NPC disease, leads to increased partitioning of APP/CTF into lipid rafts resulting in increased amyloidogenic processing of APP in these cholesterol-rich membranes. 20138836 2010
Entrez Id: 382
Gene Symbol: ARF6
ARF6
0.010 Biomarker disease BEFREE Unregulated ARF6 activation attenuates the NPC phenotype at least in part by decreasing cholesterol accumulation and restoring normal sphingolipid trafficking. 19365558 2009
Entrez Id: 143872
Gene Symbol: ARHGAP42
ARHGAP42
0.010 AlteredExpression disease BEFREE Immunohistochemical analysis indicated that NPC patients with highly ARHGAP42 expression were significantly associated with shorter metastasis-free survival. 29936709 2018
Entrez Id: 8289
Gene Symbol: ARID1A
ARID1A
0.010 Biomarker disease BEFREE Loss of ARID1A promotes proliferation, migration and invasion via the Akt signaling pathway in NPC. 31213911 2019
Entrez Id: 23568
Gene Symbol: ARL2BP
ARL2BP
0.010 AlteredExpression disease BEFREE Although high expression of miR-BARTs has been detected in NPC patients, contributions of these more recently discovered viral products to the establishment of TME are still vaguely defined. 29617291 2018
Entrez Id: 472
Gene Symbol: ATM
ATM
0.020 Biomarker disease BEFREE Taken together, our data demonstrate that downregulation of FoxM1 could improve the sensitivity of NPC cells to cisplatin through inhibition of MRN-ATM-mediated DNA repair, which could be related to FoxM1-dependent regulation of NBS1.[BMB Reports 2019; 52(3): 208-213]. 30638177 2019