Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 Biomarker phenotype LHGDN Overall, no consistent changes were observed at follow-up [during chemotherapy (n=20), MRD (n=37), relapse (n=26))] in forty-five patients, the mean activities (as percentages of values at diagnosis) were 97% (Pgp), 103% (MRP) and 102% (BCRP). 12604403 2003
Entrez Id: 4363
Gene Symbol: ABCC1
ABCC1
0.010 Biomarker phenotype BEFREE Our findings indicate a considerable and direct relationship between mRNA expression levels of ABCA2, ABCA3, MDR1, and MRP1 genes and positive minimal residual disease (MRD) measured after one year of treatment. 24145140 2014
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 AlteredExpression phenotype LHGDN Nevertheless, an ABCG2 higher expression appeared associated with a worse PFS and levels of this gene paralleled the status of minimal residual disease. 17701580 2007
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 AlteredExpression phenotype LHGDN We investigated expression of multidrug resistance genes MDR1, LRP and BCRP and antiapoptotic gene Bcl-2 in leukemic cells at diagnosis, and MRD level at the end of induction therapy, and could not find obvious relations between these parameters. 18806751 2008
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 AlteredExpression phenotype BEFREE Nevertheless, an ABCG2 higher expression appeared associated with a worse PFS and levels of this gene paralleled the status of minimal residual disease. 17701580 2007
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 Biomarker phenotype LHGDN Emergence of MRD is thus not accompanied by either upregulation of ABC-transporter function during or after chemotherapy or by selection of pre-existing highly resistant subpopulations. 12604403 2003
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE Pharmacological inhibition of c-FOS, DUSP1 and BCR-ABL eradicated MRD in multiple in vivo models, as well as in mice xenotransplanted with patient-derived primary CML cells. 28319094 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE Current treatment with tyrosine kinase inhibitors is directed against the constitutively active ABL1 domain of the fusion protein, and minimal residual disease (MRD) after therapy is monitored by real-time quantitative PCR (RQ-PCR) of the fusion transcript. 28377570 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE Design and analytic validation of BCR-ABL1 quantitative reverse transcription polymerase chain reaction assay for monitoring minimal residual disease. 22208485 2012
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE Monitoring of minimal residual disease (MRD) by quantification of BCR-ABL1 transcript levels has become a main part of the management of patients with BCR-ABL1-positive acute lymphoblastic leukemia (ALL) in treatment with tyrosine kinase inhibitors (TKIs). 24630366 2014
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE We have developed a competitive polymerase chain reaction (PCR) titration assay that estimates the number of BCR-ABL transcripts in chronic myeloid leukemia patients to monitor minimal residual disease after bone marrow transplantation (BMT). 8400243 1993
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE The results show that TD-FISH effectively discriminates between cells with overlapping BCR and ABL signals from cells with true BCR/ABL fusion and improves the ability to quantify minimal residual disease from >23% to >1% of 500 interphase nuclei. 14697634 2004
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE A 17-year-old girl with B-cell precursor acute lymphoblastic leukemia (BCP-ALL) with persistent minimal residual disease (MRD) who underwent standard chemotherapy was found to have a BCR-ABL1-like gene expression pattern. 27860260 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE Recently, an International Scale was proposed for standardizing BCR-ABL transcript measurements and reporting in the assessment of minimal residual disease by real-time quantitative polymerase chain reaction (RQ-PCR). 18223279 2008
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 GeneticVariation phenotype BEFREE Our report suggests a feasible pipeline, in terms of costs and reproducibility, aimed at characterizing and quantifying the genomic BCR-ABL1 rearrangement during MRD monitoring in CML patients. 29541390 2018
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE MRD was evaluated by real-time quantitative polymerase chain reaction (RQ-PCR) using probes derived from fusion chimeric genes (BCR/ABL and MLL/AF4) (n=22) or rearrangements of the T-cell receptor or immunoglobulin genes (n=21). 17488684 2007
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE The presence of typical and atypical BCR-ABL fusion genes in leukocytes of normal individuals: biologic significance and implications for the assessment of minimal residual disease. 9787174 1998
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE Given the high rates of clinical and cytogenetic remission achieved, the molecular monitoring of BCR-ABL transcript levels by RT-qPCR has become always more important to assess minimal residual disease. 16988930 2006
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE The threshold was set at 150 WT1 copies/104 ABL copies as the optimal cut-off value of MRD level post induction in childhood AML. 26221900 2015
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 GeneticVariation phenotype BEFREE In this article, we discuss the difference in sensitivity of detection for MRD between the BCR-ABL fusion gene and CDRIII in Philadelphia chromosome-positive (Ph+) B-ALL, as well as the possible clinical application of this method to predict relapse and prognosis. 8062887 1994
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE In the prospective study, we examined hematopoietic mixed chimerism (using polymerase chain reaction (PCR) of variable number of tandem repeat-VNTR sequences) and minimal residual disease (MRD) status (using qualitative and in the case of positivity quantitative reverse transcriptase polymerase chain reaction (RT-PCR) for the BCR/ABL fusion mRNA) in serial peripheral blood samples taken from 25 patients after bone marrow transplantation (BMT) for chronic myeloid leukemia (CML). 10713331 2000
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE We investigated the persistence of host-type hematopoiesis as defined by mixed chimerism (MC) in 28 male patients with chronic myelogenous leukemia (CML) who underwent opposite sex, non-T cell-depleted bone marrow transplantation (BMT) by amplification of Y-chromosome specific sequences, and correlated these results with the detection of minimal residual disease (MRD) by BCR/ABL mRNA amplification. 8750276 1995
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 Biomarker phenotype BEFREE BCR/ABL1 MRD negative patients at TP1 had a relapse risk similar to those who were IG/TR MRD negative (1/8 relapses). 29079599 2018
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE The other discordant case showed high BCR-ABL1 RNA level while the other methods did not detect any MRD. 19157547 2009
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 AlteredExpression phenotype BEFREE A high level of MRD was associated with high WBC counts, increased age, BCR-ABL1 fusion gene, MLL rearrangements and adverse karyotypes. 27212157 2016