Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 162417
Gene Symbol: NAGS
NAGS
0.010 GeneticVariation disease BEFREE Propionic acidemia (PA) and methylmalonic acidemia (MMA) are rare autosomal recessive inborn errors of metabolism characterized by hyperammonemia due to N-acetylglutamate synthase (NAGS) dysfunction. 31196016 2019
Entrez Id: 29968
Gene Symbol: PSAT1
PSAT1
0.010 GeneticVariation disease BEFREE CRISPR-edited MUT and PCCA HEK293 cells recapitulate primary defects of MMA and PA and have upregulation of transcripts associated with serine and thiol metabolism including PSAT1. 31449969 2019
Entrez Id: 51742
Gene Symbol: ARID4B
ARID4B
0.010 AlteredExpression disease BEFREE We studied the correlations between plasma L-arginine levels, plasma branched chain amino acids (BCAA: L-isoleucine, L-leucine and L-valine) levels (amino acids known to influence growth), and height in MMA/PA and UCD patients. 30827756 2019
Entrez Id: 2878
Gene Symbol: GPX3
GPX3
0.010 GeneticVariation disease BEFREE Our results suggest that at excess NH3, the DNA methylation status of the HIF-1α binding site of GPX3 in newborns with PA is demethylated (TGTTTTTTATG allele). 30753843 2019
Entrez Id: 4594
Gene Symbol: MMUT
MMUT
0.010 Biomarker disease BEFREE Deficiency of propionyl-CoA carboxylase causes propionic acidemia and deficiencies of methylmalonyl-CoA mutase or its cofactor adenosylcobalamin cause methylmalonic acidemia. 31451751 2019
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.010 PosttranslationalModification disease BEFREE Our results suggest that at excess NH3, the DNA methylation status of the HIF-1α binding site of GPX3 in newborns with PA is demethylated (TGTTTTTTATG allele). 30753843 2019
Entrez Id: 174
Gene Symbol: AFP
AFP
0.010 AlteredExpression disease BEFREE Alpha-fetoprotein (αFP) levels were increased in 8/16 and 3/12 PA and MMA patients, respectively, and tended to increase with age. 29433791 2018
Entrez Id: 4968
Gene Symbol: OGG1
OGG1
0.010 AlteredExpression disease BEFREE The results show that oral treatment with MitoQ or resveratrol decreases lipid peroxidation and the expression levels of DNA repair enzyme OGG1 in PA mouse liver, as well as inducing tissue-specific changes in the expression of antioxidant enzymes. 28774709 2017
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.010 AlteredExpression disease BEFREE The results show that oral treatment with MitoQ or resveratrol decreases lipid peroxidation and the expression levels of DNA repair enzyme OGG1 in PA mouse liver, as well as inducing tissue-specific changes in the expression of antioxidant enzymes. 28774709 2017
Entrez Id: 3753
Gene Symbol: KCNE1
KCNE1
0.010 Biomarker disease BEFREE It can be assumed that acute and chronic effects of accumulating metabolites on the KvLQT1/KCNE1 channel protein may similarly cause the hearing impairment of patients with propionic acidemia. 28193246 2017
Entrez Id: 7276
Gene Symbol: TTR
TTR
0.010 Biomarker disease BEFREE Under these targeted conditions, both vectors mediated significant long-term correction of circulating metabolites, demonstrating that correction of muscle and likely other tissue types in addition to liver is necessary to fully correct pathology caused by PA. Liver-specific AAV8-TTR-PCCA mediated better correction than AAV1-MCK-PCCA. 25046265 2014
Entrez Id: 1421
Gene Symbol: CRYGD
CRYGD
0.030 GeneticVariation disease BEFREE The autosomal recessive disease propionic acidemia (PA) is an inborn error of metabolism with highly variable clinical manifestations, caused by a deficiency of propionyl-CoA carboxylase (PCC) enzyme, due to mutations in either PCCA or PCCB genes, which encode the alpha and beta subunits of the PCC enzyme, respectively. 25865301 2015
Entrez Id: 1421
Gene Symbol: CRYGD
CRYGD
0.030 AlteredExpression disease BEFREE Splicing defects account for 16% of the mutant alleles in the PCCA and PCCB genes, encoding both subunits of the propionyl-CoA carboxylase (PCC) enzyme, defective in propionic acidemia, one of the most frequent organic acidemias causing variable neurological impairment. 21094621 2011
Entrez Id: 1421
Gene Symbol: CRYGD
CRYGD
0.030 GeneticVariation disease BEFREE This initial screen has identified a range of mutant PCC proteins that are sufficiently stable to be purified and subsequently used for structure-function analysis to further elucidate the complex relationship between genotype and phenotype in propionic acidemia. 12007220 2002
Entrez Id: 7386
Gene Symbol: UQCRFS1
UQCRFS1
0.100 CausalMutation disease CLINVAR
Entrez Id: 64087
Gene Symbol: MCCC2
MCCC2
0.110 GeneticVariation disease BEFREE Thus, we have constructed three site-directed mutants of biotin carboxylase that are homologous to three missense mutations found in propionic acidemia or methylcrotonylglycinuria patients. 14960587 2004
Entrez Id: 64087
Gene Symbol: MCCC2
MCCC2
0.110 Biomarker disease HPO
Entrez Id: 6584
Gene Symbol: SLC22A5
SLC22A5
0.300 Biomarker disease GENOMICS_ENGLAND Advantages and pitfalls of an extended gene panel for investigating complex neurometabolic phenotypes. 27604308 2016
Entrez Id: 6584
Gene Symbol: SLC22A5
SLC22A5
0.300 Biomarker disease GENOMICS_ENGLAND An atlas of genetic influences on human blood metabolites. 24816252 2014
Entrez Id: 5096
Gene Symbol: PCCB
PCCB
0.800 GeneticVariation disease BEFREE Generation and characterization of a human iPSC line (UAMi004-A) from a patient with propionic acidemia due to defects in the PCCB gene. 31132581 2019
Entrez Id: 5095
Gene Symbol: PCCA
PCCA
0.800 Biomarker disease BEFREE CRISPR-edited MUT and PCCA HEK293 cells recapitulate primary defects of MMA and PA and have upregulation of transcripts associated with serine and thiol metabolism including PSAT1. 31449969 2019
Entrez Id: 5096
Gene Symbol: PCCB
PCCB
0.800 GeneticVariation disease BEFREE <b>Background:</b> Propionic acidemia (PA) is an extremely rare autosomal recessive disorder which is caused by the deficiency of propionyl-CoA carboxylase (PCC) and associated with pathogenic variants in PCCA or PCCB gene. 30186825 2018
Entrez Id: 5096
Gene Symbol: PCCB
PCCB
0.800 GeneticVariation disease CLINVAR Identification of 34 novel mutations in propionic acidemia: Functional characterization of missense variants and phenotype associations. 30274917 2018
Entrez Id: 5096
Gene Symbol: PCCB
PCCB
0.800 Biomarker disease GENOMICS_ENGLAND Epilepsy in Propionic Acidemia: Case Series of 14 Saudi Patients. 30014764 2018
Entrez Id: 5095
Gene Symbol: PCCA
PCCA
0.800 CausalMutation disease CLINVAR Fibroblast growth factor 21 as a biomarker for long-term complications in organic acidemias. 30159853 2018