Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 727837
Gene Symbol: SSX2B
SSX2B
0.100 Biomarker disease BEFREE Immunoreactivity of a Monoclonal Antibody to SS18-SSX Fusion Gene Product in Formalin-fixed Paraffin-embedded Synovial Sarcoma Tissue Section. 27362474 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 Biomarker disease BEFREE The SS18-SSX Oncoprotein Hijacks KDM2B-PRC1.1 to Drive Synovial Sarcoma. 29502955 2018
Entrez Id: 952
Gene Symbol: CD38
CD38
0.100 Biomarker disease BEFREE The gold standard for SS diagnosis is characterization of the t(X;18) chromosomal translocation. 29490565 2018
Entrez Id: 727837
Gene Symbol: SSX2B
SSX2B
0.100 Biomarker disease BEFREE The SS18-SSX Oncoprotein Hijacks KDM2B-PRC1.1 to Drive Synovial Sarcoma. 29502955 2018
Entrez Id: 6857
Gene Symbol: SYT1
SYT1
0.100 Biomarker disease BEFREE A transbronchial biopsy was performed, and immunohistochemical results as well as detection of SYT-SSX1 (SYnovial sarcoma Translocation-Synovial Sarcoma X chromosome breakpoint) transcripts resulted in a diagnosis of synovial sarcoma. 29455826 2018
Entrez Id: 727837
Gene Symbol: SSX2B
SSX2B
0.100 AlteredExpression disease BEFREE Additionally, we showed that SS can originate from periosteal cells expressing SS18-SSX alone and from preosteoblasts expressing the fusion oncogene accompanied by the added stabilization of β-catenin, which is a common secondary change in SS. 29202462 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 AlteredExpression disease BEFREE Meta-analyses showed that the test of detecting MDM2 amplification by fluorescence in situ hybridization was accurate in differentiating atypical lipomatous tumor/well-differentiated liposarcoma/dedifferentiated liposarcoma from benign tumors (N = 971; sensitivity = 95%, 95% confidence interval [CI] 89-98; specificity = 100%, CI 89-100) or from other STS (N = 347; sensitivity = 99%, CI 72-100; specificity = 90%, CI 78-95); that the test of detecting SS18-SSX fusion by reverse transcription polymerase chain reaction (PCR) was accurate in differentiating synovial sarcoma from other STS (N = 532; sensitivity = 93%, CI 85-96; specificity = 99%, CI 96-100). 29709714 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 Biomarker disease BEFREE We demonstrate that BRD9 supports oncogenic mechanisms underlying the SS18-SSX fusion in synovial sarcoma and highlight targeted degradation of BRD9 as a potential therapeutic opportunity in this disease. 30431433 2018
Entrez Id: 727837
Gene Symbol: SSX2B
SSX2B
0.100 Biomarker disease BEFREE Isobaric tags for relative and absolute quantitation (i-TRAQ) analyses identified approximate 1700-2,000 proteins regulated by the SS18/SSX fusion in each SS cell line. 30680066 2018
Entrez Id: 6757
Gene Symbol: SSX2
SSX2
0.100 Biomarker disease BEFREE The SS18-SSX Oncoprotein Hijacks KDM2B-PRC1.1 to Drive Synovial Sarcoma. 29502955 2018
Entrez Id: 6756
Gene Symbol: SSX1
SSX1
0.100 Biomarker disease BEFREE A transbronchial biopsy was performed, and immunohistochemical results as well as detection of SYT-SSX1 (SYnovial sarcoma Translocation-Synovial Sarcoma X chromosome breakpoint) transcripts resulted in a diagnosis of synovial sarcoma. 29455826 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 AlteredExpression disease BEFREE These findings explain the skeletal contact frequently observed in human SS and may provide alternate means of enabling SS18-SSX-driven oncogenesis in cells as differentiated as preosteoblasts. 29202462 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 GeneticVariation disease BEFREE Synovial sarcoma (SS) is a rare sarcoma driven by a translocation between SS18 and SSX 1, 2, or 4. 29220290 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 GeneticVariation disease BEFREE Synovial sarcoma (SS), a translocation-associated sarcoma characterized by SS18-SSX1/2 fusion, presents most often in the extremities of young adults. 29543673 2018
Entrez Id: 727837
Gene Symbol: SSX2B
SSX2B
0.100 AlteredExpression disease BEFREE Meta-analyses showed that the test of detecting MDM2 amplification by fluorescence in situ hybridization was accurate in differentiating atypical lipomatous tumor/well-differentiated liposarcoma/dedifferentiated liposarcoma from benign tumors (N = 971; sensitivity = 95%, 95% confidence interval [CI] 89-98; specificity = 100%, CI 89-100) or from other STS (N = 347; sensitivity = 99%, CI 72-100; specificity = 90%, CI 78-95); that the test of detecting SS18-SSX fusion by reverse transcription polymerase chain reaction (PCR) was accurate in differentiating synovial sarcoma from other STS (N = 532; sensitivity = 93%, CI 85-96; specificity = 99%, CI 96-100). 29709714 2018
Entrez Id: 6757
Gene Symbol: SSX2
SSX2
0.100 Biomarker disease BEFREE Epigenetic ConFUSION: SS18-SSX Fusion Rewires BAF Complex to Activate Bivalent Genes in Synovial Sarcoma. 29894696 2018
Entrez Id: 6756
Gene Symbol: SSX1
SSX1
0.100 GeneticVariation disease BEFREE Synovial sarcoma (SS) is characterized by a tumour specific chromosomal translocation t(X;18) (p11;q11) which results in the formation of SYT-SSX1 fusion protein. 30219714 2018
Entrez Id: 6760
Gene Symbol: SS18
SS18
0.100 Biomarker disease BEFREE In this study, we conducted proteomic studies using <i>SS18</i>/<i>SSX</i> knockdown in three SS cell lines to identify the regulated proteins associated with SS18/SSX in SS. 30680066 2018
Entrez Id: 6757
Gene Symbol: SSX2
SSX2
0.100 AlteredExpression disease BEFREE This review summarises our current understanding of the function of SS18-SSX and the mechanisms by which it alters the epigenetic landscape of permissive cells to induce transformation and the subsequent development of synovial sarcoma. 30506527 2018
Entrez Id: 727837
Gene Symbol: SSX2B
SSX2B
0.100 Biomarker disease BEFREE Here we demonstrate that SS18-SSX globally hijacks BAF complexes on chromatin to activate an SS transcriptional signature that we define using primary tumors and cell lines. 29861296 2018
Entrez Id: 6857
Gene Symbol: SYT1
SYT1
0.100 GeneticVariation disease BEFREE Synovial sarcoma (SS) is characterized by a tumour specific chromosomal translocation t(X;18) (p11;q11) which results in the formation of SYT-SSX1 fusion protein. 30219714 2018
Entrez Id: 6857
Gene Symbol: SYT1
SYT1
0.100 GeneticVariation disease BEFREE Synovial sarcoma (SS) is genetically characterized by chromosomal translocation, which generates <i>SYT-SSX</i> fusion transcripts. 29491688 2018
Entrez Id: 6757
Gene Symbol: SSX2
SSX2
0.100 Biomarker disease BEFREE Isobaric tags for relative and absolute quantitation (i-TRAQ) analyses identified approximate 1700-2,000 proteins regulated by the SS18/SSX fusion in each SS cell line. 30680066 2018
Entrez Id: 7088
Gene Symbol: TLE1
TLE1
0.100 Biomarker disease BEFREE Although still of potential use, we urge caution in the interpretation of TLE1 when the differential diagnosis includes both SS and MRT or ATRT. 29490565 2018
Entrez Id: 6756
Gene Symbol: SSX1
SSX1
0.100 Biomarker disease BEFREE Our analyses revealed that the primary tumor and NCC-SS1-C1 cell line harbored the SS18-SSX1 fusion gene typical of synovial sarcoma and similar proteomics profiles. 29450702 2018