Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23275
Gene Symbol: POFUT2
POFUT2
0.010 GeneticVariation group BEFREE Knockout of POFUT2 results in embryonic lethality in mice, and inactivating mutations in B3GLCT cause Peters plus syndrome, a congenital disorder of glycosylation in humans. 31463900 2020
Entrez Id: 55790
Gene Symbol: CSGALNACT1
CSGALNACT1
0.010 Biomarker group BEFREE Our data indicate that biallelic loss-of-function mutations in CSGALNACT1 disturb glycosaminoglycan synthesis and cause a mild skeletal dysplasia with advanced bone age, CSGALNACT1-CDG. 31705726 2020
Entrez Id: 6487
Gene Symbol: ST3GAL3
ST3GAL3
0.010 GeneticVariation group BEFREE Three missense variants of ST3GAL3 are known to be responsible for a congenital disorder of glycosylation determining a neurodevelopmental disorder (intellectual disability/epileptic encephalopathy). 31584066 2020
Entrez Id: 6747
Gene Symbol: SSR3
SSR3
0.010 Biomarker group BEFREE A novel frameshift variant in the translocon associated protein, SSR3, disrupts the stability of the TRAP complex and causes a novel Congenital Disorder of Glycosylation. 30945312 2019
Entrez Id: 2530
Gene Symbol: FUT8
FUT8
0.010 Biomarker group BEFREE The clinical characteristics of patients with FUT8-CDG include intrauterine growth retardation, feeding difficulties, hypotonia, microcephaly, seizures, short stature, developmental delay, and respiratory abnormalities. 31580894 2019
Entrez Id: 338
Gene Symbol: APOB
APOB
0.010 Biomarker group BEFREE We report hypobetalipoproteinemia (LDL cholesterol [LDL-C] and apolipoprotein B below the fifth percentile) in a large cohort of patients with type I CDG (mean age, 9 years), together with reduced LDL-C and apolipoprotein B in clinically unaffected heterozygous relatives (mean age, 46 years), compared with 2 separate sets of age- and sex-matched control subjects. 31117816 2019
Entrez Id: 231
Gene Symbol: AKR1B1
AKR1B1
0.010 Biomarker group BEFREE Repurposing the aldose reductase inhibitor and diabetic neuropathy drug epalrestat for the congenital disorder of glycosylation PMM2-CDG. 31636082 2019
Entrez Id: 8869
Gene Symbol: ST3GAL5
ST3GAL5
0.010 GeneticVariation group BEFREE Total loss of GM3 synthase activity by a normally processed enzyme in a novel variant and in all ST3GAL5 variants reported to cause a distinct congenital disorder of glycosylation. 30576498 2019
Entrez Id: 866
Gene Symbol: SERPINA6
SERPINA6
0.010 AlteredExpression group BEFREE Similarly, plasma CBG levels in both ELISAs were much higher than BCA values in several CDG patients. 31307013 2019
Entrez Id: 85365
Gene Symbol: ALG2
ALG2
0.010 GeneticVariation group BEFREE CDG screening in Argentina from 2007 to 2017 revealed 4 PMM2-CDG patients, 2 ALG2-CDG patients with a novel homozygous gene variant and 1 CDG-IIx. 30397276 2018
Entrez Id: 116443
Gene Symbol: GRIN3A
GRIN3A
0.010 GeneticVariation group BEFREE We also found (either using a panel of inhibitors or by studying human fibroblasts derived from patients with a congenital disorder of glycosylation) that <i>N</i>-glycan remodeling is not required for the surface delivery of GluN3A-containing NMDARs. 29915530 2018
Entrez Id: 7018
Gene Symbol: TF
TF
0.010 GeneticVariation group BEFREE A type 2 pattern was found in two patients: one with a CDG-IIx and one with a transferrin protein variant. 30397276 2018
Entrez Id: 23443
Gene Symbol: SLC35A3
SLC35A3
0.010 GeneticVariation group BEFREE "Step-by-step" diagnosis pathways of four particular and new CDG cases, including MGAT2-CDG, ATP6V0A2-CDG, SLC35A2-CDG, and SLC35A3-CDG, are described as illustrative examples. 29869806 2018
Entrez Id: 84317
Gene Symbol: CCDC115
CCDC115
0.010 Biomarker group BEFREE Besides pointing to the importance of CDG screening in patients with unexplained and severe liver disease, these reports expand the clinical and molecular phenotypes of CCDC115-CDG. 29759592 2018
Entrez Id: 85476
Gene Symbol: GFM1
GFM1
0.010 GeneticVariation group BEFREE While exome sequencing was negative for CDG related candidate genes, the testing revealed compound heterozygous mutations in the mitochondrial elongation factor G gene (GFM1). 28216230 2017
Entrez Id: 10329
Gene Symbol: RXYLT1
RXYLT1
0.010 Biomarker group BEFREE Besides, it discusses novel phenotypes of known CDG (DHDDS-CDG, ALG9-CDG, EXT2-CDG, PIGA-CDG, PIGN-CDG), the elucidation of putative glycosyltransferase disorders as O-mannosylglycan synthesis disorders (TMEM5-CDG, ISPD-CDG, FKTN-CDG, FKRP-CDG), a novel CDG mechanism, advances in diagnosis, pathogenesis, treatment and finally an updated list of the 104 known CDG. 28484880 2017
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.010 AlteredExpression group BEFREE These results show selective impairment of IGF-1-induced DNA synthesis in lymphocytes of CDG patients through decreased gene expression and hypoglycosylation of the IGF-1 receptor. 27089502 2017
Entrez Id: 5861
Gene Symbol: RAB1A
RAB1A
0.010 AlteredExpression group BEFREE We demonstrate that the COG complex cooperates with Rab1 and Golgi phosphoprotein 3 to regulate Golgi trafficking and that overexpression of Rab1 can rescue the cytokinesis and locomotor defects associated with loss of Cog7<i>.</i> Our results suggest that the <i>Drosophila</i> COG7-CDG model can be used to test novel potential therapeutic strategies by modulating trafficking pathways. 28883096 2017
Entrez Id: 2821
Gene Symbol: GPI
GPI
0.010 Biomarker group BEFREE The structures also rationalize the loss of dolichylphosphate mannose synthase function in dpm1-associated CDG.The generation of glycolipid dolichylphosphate mannose (Dol-P-Man) is a critical step for protein glycosylation and GPI anchor synthesis. 28743912 2017
Entrez Id: 6038
Gene Symbol: RNASE4
RNASE4
0.010 AlteredExpression group BEFREE We demonstrate that the COG complex cooperates with Rab1 and Golgi phosphoprotein 3 to regulate Golgi trafficking and that overexpression of Rab1 can rescue the cytokinesis and locomotor defects associated with loss of Cog7<i>.</i> Our results suggest that the <i>Drosophila</i> COG7-CDG model can be used to test novel potential therapeutic strategies by modulating trafficking pathways. 28883096 2017
Entrez Id: 60684
Gene Symbol: TRAPPC11
TRAPPC11
0.010 GeneticVariation group BEFREE Mutations in TRAPPC11 are associated with a congenital disorder of glycosylation. 27862579 2017
Entrez Id: 3240
Gene Symbol: HP
HP
0.010 Biomarker group BEFREE Although secondary glycosylation defects such as alcoholism, untreated fructosemia and bacterial neuraminidase remain to be excluded, we showed that 2-DE pattern of haptoglobin β glycoforms thus constitute a very reliable additional biomarker of all types of CDGs. 28457853 2017
Entrez Id: 537
Gene Symbol: ATP6AP1
ATP6AP1
0.010 GeneticVariation group BEFREE We distinguish two main groups: on the one hand, the CDG types with predominant or isolated liver involvement including MPI-CDG, TMEM199-CDG, CCDC115-CDG, and ATP6AP1-CDG, and on the other hand, the CDG types associated with liver disease but not as a striking, unique or predominant feature, including PMM2-CDG, ALG1-CDG, ALG3-CDG, ALG6-CDG, ALG8-CDG, ALG9-CDG, PGM1-CDG, and COG-CDG. 28108845 2017
Entrez Id: 2160
Gene Symbol: F11
F11
0.010 Biomarker group BEFREE All N-glycoproteins tested in these patients (α1-antitrypsin, FXI and transferrin) had electrophoretic, HPLC and Q-TOF patterns indistinguishable from those of the congenital disorders of glycosylation (rare recessive multisystem disorders). 27214821 2016
Entrez Id: 6748
Gene Symbol: SSR4
SSR4
0.010 GeneticVariation group BEFREE Recently, we described a single CDG patient with a de novo mutation in the X-linked gene, Signal Sequence Receptor 4 (SSR4). 26264460 2015