Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2475
Gene Symbol: MTOR
MTOR
0.010 Biomarker disease BEFREE This review discusses recent research highlighting the complex role of mTOR associated with the presence of two hallmarks of AD pathology, senile plaques (composed mostly of fibrillar Aß peptides), and NFT (composed mostly of hyperphosphorylated tau protein). 28807816 2018
Entrez Id: 7220
Gene Symbol: TRPC1
TRPC1
0.010 Biomarker disease BEFREE Here, we found that TRPC1 deletion did not affect learning and memory in physiological conditions, while it aggravated learning and memory deficits induced by amyloid-β (Aβ), the major component of the senile plaques observed in the brains of Alzheimer's disease (AD). 29660945 2018
Entrez Id: 183
Gene Symbol: AGT
AGT
0.010 Biomarker disease BEFREE Angiotensin II (AngII) via AT1 receptor is reported to increase brain level via different mechanisms including increasing amyloid precursor protein (APP) mRNA, β-secretase activity, and presenilin expression. 29760662 2018
Entrez Id: 4900
Gene Symbol: NRGN
NRGN
0.010 AlteredExpression disease BEFREE Higher CSF Ng levels were positively associated with greater Aβ neuritic plaque (Consortium to Establish a Registry for Alzheimer's Disease (CERAD) neuritic plaque score, p = 0.0002) and tau tangle pathology (Braak neurofibrillary tangles staging, p = 0.0007) scores. 29700597 2018
Entrez Id: 5465
Gene Symbol: PPARA
PPARA
0.010 Biomarker disease BEFREE This study reveals a new function of aspirin in stimulating lysosomal biogenesis via PPARα and suggests that low-dose aspirin may be used in lowering storage materials in Alzheimer's disease and lysosomal storage disorders.<b>SIGNIFICANCE STATEMENT</b> Developing drugs for the reduction of amyloid β containing senile plaques, one of the pathological hallmarks of Alzheimer's disease (AD), is an important area of research. 29967008 2018
Entrez Id: 472
Gene Symbol: ATM
ATM
0.010 Biomarker disease BEFREE Angiotensin II (AngII) via AT1 receptor is reported to increase brain level via different mechanisms including increasing amyloid precursor protein (APP) mRNA, β-secretase activity, and presenilin expression. 29760662 2018
Entrez Id: 84417
Gene Symbol: ECRG4
ECRG4
0.010 GeneticVariation disease BEFREE Genome-wide significant pleiotropic associations were observed for the joint model of NP and NFT (NP + NFT) with the single-nucleotide polymorphism (SNP) rs34487851 upstream of C2orf40 (alias ECRG4, P = 2.4 × 10<sup>-8</sup>) and for the joint model of NFT and CAA (NFT + CAA) with the HDAC9 SNP rs79524815 (P = 1.1 × 10<sup>-8</sup>). 29458411 2018
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.010 Biomarker disease BEFREE Immunohistochemical analyses in human temporal cortical sections with a validated antibody for TLR-3 predominantly identified microglia, particularly strongly in cells associated with amyloid plaques, also brain vascular endothelial cells and subsets of astrocytes, but not neurons or p62-immunoreactive structures. 30076830 2018
Entrez Id: 1113
Gene Symbol: CHGA
CHGA
0.010 Biomarker disease BEFREE <i>Rt</i> (10 <i>μ</i>g/ml) significantly inhibited the mean protein level of interleukin-1<i>β</i> (IL-1<i>β</i>) in the organotypic hippocampal slice cultures following treatment with chromogranin A (CGA, 10 nM) and pancreastatin (10 nM), endogenous microglial activators present in senile plaques. 29854069 2018
Entrez Id: 3827
Gene Symbol: KNG1
KNG1
0.010 AlteredExpression disease BEFREE These new assays show that decreased HKi and increased HKc levels in AD plasma correlate with dementia and neuritic plaque scores. 30310850 2018
Entrez Id: 9734
Gene Symbol: HDAC9
HDAC9
0.010 GeneticVariation disease BEFREE Genome-wide significant pleiotropic associations were observed for the joint model of NP and NFT (NP + NFT) with the single-nucleotide polymorphism (SNP) rs34487851 upstream of C2orf40 (alias ECRG4, P = 2.4 × 10<sup>-8</sup>) and for the joint model of NFT and CAA (NFT + CAA) with the HDAC9 SNP rs79524815 (P = 1.1 × 10<sup>-8</sup>). 29458411 2018
Entrez Id: 9197
Gene Symbol: SLC33A1
SLC33A1
0.010 Biomarker disease BEFREE Angiotensin II (AngII) via AT1 receptor is reported to increase brain level via different mechanisms including increasing amyloid precursor protein (APP) mRNA, β-secretase activity, and presenilin expression. 29760662 2018
Entrez Id: 6272
Gene Symbol: SORT1
SORT1
0.010 Biomarker disease BEFREE The C-terminal sortilin antibody, which labeled senile plaques in the AD human cerebral sections, did not display extracellular immunolabeling in the transgenic mouse or aged monkey brain sections with Aβ deposition. 29690919 2018
Entrez Id: 970
Gene Symbol: CD70
CD70
0.010 Biomarker disease BEFREE Accordingly, 18 week-old, chow diet-fed CD70-deficient Apoe<sup>-/-</sup> mice displayed larger atheroma characterised by lower cellularity and more advanced plaque phenotype than Apoe<sup>-/-</sup> mice. 27786334 2017
Entrez Id: 10855
Gene Symbol: HPSE
HPSE
0.010 AlteredExpression disease BEFREE At the extracellular level, HPSE was observed only in neuritic plaques with a fragmented core, while HPSE2 appeared in those with compact cores as well. 28387673 2017
Entrez Id: 29058
Gene Symbol: TMEM230
TMEM230
0.010 Biomarker disease BEFREE TMEM230 accumulation is also noted around senile plaques. 28527219 2017
Entrez Id: 240
Gene Symbol: ALOX5
ALOX5
0.010 Biomarker disease BEFREE Pharmacological blockade of both COX-1/2 and 5-LOX was able to counteract the progression of AD by targeting pathophysiological mechanisms up- and downstream of and tau. 28238167 2017
Entrez Id: 8406
Gene Symbol: SRPX
SRPX
0.010 Biomarker disease BEFREE In contrast, no SRPX1 co-accumulated with Aβ deposits in senile plaques. 28478503 2017
Entrez Id: 9423
Gene Symbol: NTN1
NTN1
0.010 Biomarker disease BEFREE Molecular characterization of Netrin-1 and APP receptor binding: New leads to block the progression of senile plaques in Alzheimer's disease. 28501620 2017
Entrez Id: 60495
Gene Symbol: HPSE2
HPSE2
0.010 Biomarker disease BEFREE At the extracellular level, HPSE was observed only in neuritic plaques with a fragmented core, while HPSE2 appeared in those with compact cores as well. 28387673 2017
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.010 Biomarker disease BEFREE The secretion signal from IL2 (IL2ss) was added to allow extracellular engagement of senile plaques. 27829339 2017
Entrez Id: 7042
Gene Symbol: TGFB2
TGFB2
0.010 Biomarker disease BEFREE TGFβ2 also correlated with scores for neurofibrillary tangles, Lewy bodies (within the LBD group), dementia severity, and soluble Aβ42 concentration, but not with neuritic plaque scores, total Aβ42, or monomeric α-synuclein immunoreactivity. 27911312 2017
Entrez Id: 6252
Gene Symbol: RTN1
RTN1
0.010 Biomarker disease BEFREE Together, our data show that RTN1 and RTN3 have differential effects on the formation of senile plaques in Alzheimer's brains and that RTN3 has a more prominent role in Alzheimer's pathogenesis. 28733667 2017
Entrez Id: 406921
Gene Symbol: MIR132
MIR132
0.010 Biomarker disease BEFREE Overall, our results support the hypothesis that the miR-132/212 network, including Sirt1 and likely other target genes, contributes to abnormal Aβ metabolism and senile plaque deposition in AD. 27484949 2016
Entrez Id: 23411
Gene Symbol: SIRT1
SIRT1
0.010 Biomarker disease BEFREE Overall, our results support the hypothesis that the miR-132/212 network, including Sirt1 and likely other target genes, contributes to abnormal Aβ metabolism and senile plaque deposition in AD. 27484949 2016