Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5037
Gene Symbol: PEBP1
PEBP1
0.010 Biomarker disease BEFREE Finally, we prove the clinical relevance of these findings by showing that RKIP loss is a frequent event in chronic myelomonocytic leukemia, and that it co-occurs with <i>RAS</i>-signaling mutations. 31097632 2020
Entrez Id: 8243
Gene Symbol: SMC1A
SMC1A
0.010 GeneticVariation disease BEFREE Chronic myelomonocytic leukemia with ETV6-ABL1 rearrangement and SMC1A mutation. 31425923 2019
Entrez Id: 11143
Gene Symbol: KAT7
KAT7
0.010 Biomarker disease BEFREE NUP98-HBO1-fusion generates phenotypically and genetically relevant chronic myelomonocytic leukemia pathogenesis. 30944097 2019
Entrez Id: 23762
Gene Symbol: OSBP2
OSBP2
0.010 GeneticVariation disease BEFREE Zinc-finger nuclease-mediated homologous recombination revealed that correction of PTPN11 mutation in iPSCs with PTPN11 and OSBP2 mutations resulted in reduced CD34<sup>+</sup> cell generation to a level similar to that obtained with JMML iPSC colonies with the wild-type of both genes, and interestingly, to that obtained with normal iPSC colonies. 31222725 2019
Entrez Id: 383
Gene Symbol: ARG1
ARG1
0.010 GeneticVariation disease BEFREE Overexpression of Arginase 1 is linked to DNMT3A and TET2 mutations in lower-grade myelodysplastic syndromes and chronic myelomonocytic leukemia. 29227812 2018
Entrez Id: 7454
Gene Symbol: WAS
WAS
0.010 GeneticVariation disease BEFREE This is the first study to associate somatically acquired WASP mutations with a hematopoietic malignancy and increases insight in the complexity of the genomic landscape of JMML that shows low recurrent mutations concomitant with general hyperactivation of RAS pathway signaling. 29316027 2018
Entrez Id: 5909
Gene Symbol: RAP1GAP
RAP1GAP
0.010 GeneticVariation disease BEFREE Mutations of signal-induced proliferation-associated gene 1 (<i>SIPA1</i>), a RAP1 GTPase-activating protein, were reported in patients with juvenile myelomonocytic leukemia, a childhood myelodysplastic/myeloproliferative neoplasm (MDS/MPN). 29514790 2018
Entrez Id: 238
Gene Symbol: ALK
ALK
0.010 Biomarker disease BEFREE Crizotinib, an ALK/ROS1 inhibitor, markedly suppressed <i>ALK/ROS1</i> fusion-positive JMML cell proliferation in vitro. 29437595 2018
Entrez Id: 4210
Gene Symbol: MEFV
MEFV
0.010 GeneticVariation disease BEFREE CBL mutation and MEFV single-nucleotide variant are important genetic predictors of tumor reduction in glucocorticoid-treated patients with chronic myelomonocytic leukemia. 29600428 2018
Entrez Id: 10188
Gene Symbol: TNK2
TNK2
0.010 Biomarker disease BEFREE Chemical inhibition of TNK2 blocked MAPK signaling and colony formation in vitro and decreased disease burden in a patient with PTPN11-mutant JMML who was treated with the multikinase (including TNK2) inhibitor dasatinib. 30018082 2018
Entrez Id: 142
Gene Symbol: PARP1
PARP1
0.010 GeneticVariation disease BEFREE A Phase I Study of Topotecan, Carboplatin and the PARP Inhibitor Veliparib in Acute Leukemias, Aggressive Myeloproliferative Neoplasms, and Chronic Myelomonocytic Leukemia. 27551000 2017
Entrez Id: 1536
Gene Symbol: CYBB
CYBB
0.010 Biomarker disease BEFREE NOX2-dependent immunosuppression in chronic myelomonocytic leukemia. 28292946 2017
Entrez Id: 9846
Gene Symbol: GAB2
GAB2
0.010 GeneticVariation disease BEFREE Collectively, this study reveals an important role of the Gab2/PI3K/mTOR pathway in mediating the pathogenic signaling of the PTPN11 gain-of-function mutations and a therapeutic potential of Rapamycin for PTPN11 mutation-associated JMML. 27840422 2017
Entrez Id: 1786
Gene Symbol: DNMT1
DNMT1
0.010 AlteredExpression disease BEFREE Hypermethylation is associated with repressed chromatin, genes regulated by RAS signaling, frequent co-occurrence of RAS pathway mutations and upregulation of DNMT1 and DNMT3B, suggesting a link between activation of the DNA methylation machinery and mutational patterns in JMML. 29259247 2017
Entrez Id: 1302
Gene Symbol: COL11A2
COL11A2
0.010 GeneticVariation disease BEFREE A Phase I Study of Topotecan, Carboplatin and the PARP Inhibitor Veliparib in Acute Leukemias, Aggressive Myeloproliferative Neoplasms, and Chronic Myelomonocytic Leukemia. 27551000 2017
Entrez Id: 7056
Gene Symbol: THBD
THBD
0.010 AlteredExpression disease BEFREE Here, we describe a patient with juvenile myelomonocytic leukemia in which a prominent CD141+ cell population was identified most consistent with CD141+ MDCs based on phenotypic similarity with normal CD141+ MDCs. 28414089 2017
Entrez Id: 10661
Gene Symbol: KLF1
KLF1
0.010 PosttranslationalModification disease BEFREE We identify a cis-regulatory upstream KLF1 enhancer sequence as highly sensitive to DNA methylation and frequently hypermethylated in JMML. 28749240 2017
Entrez Id: 1789
Gene Symbol: DNMT3B
DNMT3B
0.010 PosttranslationalModification disease BEFREE Hypermethylation is associated with repressed chromatin, genes regulated by RAS signaling, frequent co-occurrence of RAS pathway mutations and upregulation of DNMT1 and DNMT3B, suggesting a link between activation of the DNA methylation machinery and mutational patterns in JMML. 29259247 2017
Entrez Id: 3587
Gene Symbol: IL10RA
IL10RA
0.010 GeneticVariation disease BEFREE Here we report a novel exonic mutation in the IL10RA gene that caused unique splicing aberrations in a Japanese patient with infantile-onset of inflammatory bowel disease in association with immune thrombocytopenic purpura and a transient clinical syndrome mimicking juvenile myelomonocytic leukemia. 26822028 2016
Entrez Id: 406942
Gene Symbol: MIR150
MIR150
0.010 AlteredExpression disease BEFREE Ectopic overexpression of miR-150-5p in mononuclear cells from three JMML patients significantly decreased cell proliferation. 27447965 2016
Entrez Id: 5897
Gene Symbol: RAG2
RAG2
0.010 Biomarker disease BEFREE Long-term serial xenotransplantation of juvenile myelomonocytic leukemia recapitulates human disease in Rag2-/-γc-/- mice. 26888021 2016
Entrez Id: 5141
Gene Symbol: PDE4A
PDE4A
0.010 AlteredExpression disease BEFREE PDE4 expression could be an effective potential prognostic factor and therapeutic target for patients with MDS and chronic myelomonocytic leukemia. 27521329 2016
Entrez Id: 6016
Gene Symbol: RIT1
RIT1
0.010 GeneticVariation disease BEFREE Mutations in RIT1 cause Noonan syndrome with possible juvenile myelomonocytic leukemia but are not involved in acute lymphoblastic leukemia. 26757980 2016
Entrez Id: 4869
Gene Symbol: NPM1
NPM1
0.010 GeneticVariation disease BEFREE Chronic myelomonocytic leukemia with nucleophosmin (NPM1) mutation. 25809997 2016
Entrez Id: 389421
Gene Symbol: LIN28B
LIN28B
0.010 AlteredExpression disease BEFREE Lastly, high LIN28B expression was associated with poor clinical outcome in our JMML patient series but was not independent from other prognostic factors such as age and age-adjusted HbF levels. 26712910 2016