Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4588
Gene Symbol: MUC6
MUC6
0.010 GeneticVariation disease BEFREE We found evidence of late-onset Alzheimer disease (LOAD)-associated genetic polymorphism within an exon of Mucin 6 (MUC6) and immediately downstream from another gene: Adaptor Related Protein Complex 2 Subunit Alpha 2 (AP2A2). 31748784 2020
Entrez Id: 161
Gene Symbol: AP2A2
AP2A2
0.010 Biomarker disease BEFREE In summary, polymorphism in a repeat-rich region near AP2A2 was associated with neocortical pTau proteinopathy (because of the unique repeats, prior genome-wide association studies were probably unable to detect this association), and AP2A2 was often colocalized with neurofibrillary tangles in LOAD. 31748784 2020
Entrez Id: 11099
Gene Symbol: PTPN21
PTPN21
0.010 Biomarker disease BEFREE The RV-NPL was applied to analyze 107 late-onset Alzheimer disease (LOAD) pedigrees of Caribbean Hispanic and European ancestry with WGS data, and statistically significant linkage (LOD ≥ 3.8) was found with RVs in PSMF1 and PTPN21 which have been shown to be involved in LOAD etiology. 31585107 2019
Entrez Id: 81858
Gene Symbol: SHARPIN
SHARPIN
0.010 GeneticVariation disease BEFREE We finally identified a rare nonsynonymous variant, rs572750141 (rs572750141" genes_norm="348;81858">NM_030974.3:p.Gly186Arg), in SHARPIN that was potentially associated with increased risk of LOAD (corrected P = 8.05 × 10<sup>- 5</sup>, odds ratio = 6.1). 31216982 2019
Entrez Id: 3375
Gene Symbol: IAPP
IAPP
0.010 Biomarker disease BEFREE A high-fat diet increased amylin accumulation in the hippocampi of hIAPP transgenic mice, which presented AD-like pathology and behavior characterized by neural degeneration, brain aging, Aβ42 deposition, and impaired glucose utilization and cognition. 31507407 2019
Entrez Id: 9491
Gene Symbol: PSMF1
PSMF1
0.010 Biomarker disease BEFREE The RV-NPL was applied to analyze 107 late-onset Alzheimer disease (LOAD) pedigrees of Caribbean Hispanic and European ancestry with WGS data, and statistically significant linkage (LOD ≥ 3.8) was found with RVs in PSMF1 and PTPN21 which have been shown to be involved in LOAD etiology. 31585107 2019
Entrez Id: 29110
Gene Symbol: TBK1
TBK1
0.010 GeneticVariation disease BEFREE In contrast, peptides deriving from microtubule-associated protein tau, presenilin 2 and serine/threonine-protein kinase TBK1 were exclusively reported to bind MHC molecules encoded by the HLA-DRB1 1501 allele, a recently-identified susceptibility gene for late onset Alzheimer's disease. 31824497 2019
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.010 Biomarker disease BEFREE Four less well-studied but promising "emerging" cerebrospinal fluid (CSF) biomarkers are elevated in late-onset Alzheimer disease (AD): neurogranin, synaptosomal-associated protein-25 (SNAP-25), visinin-like protein 1 (VILIP-1), and chitinase-3-like protein 1 (YKL-40). 30846386 2019
Entrez Id: 79661
Gene Symbol: NEIL1
NEIL1
0.010 AlteredExpression disease BEFREE On the other hand, there are no significant UNG, NEIL1 and POLβ variants that could affect their protein level and function, suggesting that there may be other factors such as post-transcriptional or-translational modifications responsible for the reduced activities and protein levels of these genes in LOAD pathogenesis. 31415677 2019
Entrez Id: 54984
Gene Symbol: PINX1
PINX1
0.010 Biomarker disease BEFREE This gene-based, transethnic approach identified PINX1, a gene involved in telomere integrity, and TREM2, a gene with a product of an immune receptor found in microglia, as associated with LOAD. 31058951 2019
Entrez Id: 5020
Gene Symbol: OXT
OXT
0.010 Biomarker disease BEFREE The implication of genome-wide significant differential methylation of OXT, encoding oxytocin, in two independent cohorts indicates it is a promising target for future studies on early biomarkers and novel therapeutic strategies in AD. 31775875 2019
Entrez Id: 4900
Gene Symbol: NRGN
NRGN
0.010 Biomarker disease BEFREE Four less well-studied but promising "emerging" cerebrospinal fluid (CSF) biomarkers are elevated in late-onset Alzheimer disease (AD): neurogranin, synaptosomal-associated protein-25 (SNAP-25), visinin-like protein 1 (VILIP-1), and chitinase-3-like protein 1 (YKL-40). 30846386 2019
Entrez Id: 63932
Gene Symbol: CXorf56
CXorf56
0.010 Biomarker disease BEFREE Collectively, these data identify a novel gene-regulatory pathway involving CXorf56 that may link apoE4 to microglia activation and inflammation associated with AD. 31198491 2019
Entrez Id: 6616
Gene Symbol: SNAP25
SNAP25
0.010 Biomarker disease BEFREE Four less well-studied but promising "emerging" cerebrospinal fluid (CSF) biomarkers are elevated in late-onset Alzheimer disease (AD): neurogranin, synaptosomal-associated protein-25 (SNAP-25), visinin-like protein 1 (VILIP-1), and chitinase-3-like protein 1 (YKL-40). 30846386 2019
Entrez Id: 1604
Gene Symbol: CD55
CD55
0.010 Biomarker disease BEFREE Somatic mutation that affects transcription factor binding upstream of CD55 in the temporal cortex of a late-onset Alzheimer disease patient. 31216356 2019
Entrez Id: 857
Gene Symbol: CAV1
CAV1
0.010 Biomarker disease BEFREE This may suggest that depletion of Cav-1 in T2DM underlies, at least in part, the development of AD and imply that restoration of Cav-1 may be a therapeutic target for diabetic-associated sporadic AD.<b>SIGNIFICANCE STATEMENT</b> More than 95% of the Alzheimer's patients have the sporadic late-onset form (LOAD). 31527120 2019
Entrez Id: 435
Gene Symbol: ASL
ASL
0.010 Biomarker disease BEFREE We expected that ASL may show widespread cortical hypoperfusion in EOAD compared to LOAD and in nonamnestic EOAD compared to amnestic EOAD. 30981825 2019
Entrez Id: 1116
Gene Symbol: CHI3L1
CHI3L1
0.010 Biomarker disease BEFREE CSF SNAP-25, VILIP-1, and YKL-40 were altered very early in the AD time course, approximately 15-19 years before estimated symptom onset. 30846386 2019
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 GeneticVariation disease BEFREE In contrast, peptides deriving from microtubule-associated protein tau, presenilin 2 and serine/threonine-protein kinase TBK1 were exclusively reported to bind MHC molecules encoded by the HLA-DRB1 1501 allele, a recently-identified susceptibility gene for late onset Alzheimer's disease. 31824497 2019
Entrez Id: 55737
Gene Symbol: VPS35
VPS35
0.010 Biomarker disease BEFREE Deficiency in VPS35 by altering APP/Aβ metabolism has been linked to late-onset Alzheimer's disease. 31289348 2019
Entrez Id: 3918
Gene Symbol: LAMC2
LAMC2
0.010 Biomarker disease BEFREE Four less well-studied but promising "emerging" cerebrospinal fluid (CSF) biomarkers are elevated in late-onset Alzheimer disease (AD): neurogranin, synaptosomal-associated protein-25 (SNAP-25), visinin-like protein 1 (VILIP-1), and chitinase-3-like protein 1 (YKL-40). 30846386 2019
Entrez Id: 1269
Gene Symbol: CNR2
CNR2
0.010 AlteredExpression disease BEFREE The aim of this study was to investigate whether activation of the CB2 receptor would restore the aberrant enhanced proliferative activity characteristic of immortalized lymphocytes from patients with late-onset Alzheimer's disease. 29736745 2018
Entrez Id: 335
Gene Symbol: APOA1
APOA1
0.010 Biomarker disease BEFREE This study reveals a novel mechanism of HDL mimetic peptide as a functional ApoE enhancer and support further development of ApoA-I 4F peptide as effective ApoE modulating agents against AD. 30474860 2018
Entrez Id: 6721
Gene Symbol: SREBF2
SREBF2
0.010 AlteredExpression disease BEFREE Furthermore, SREBF2 expression levels measured in LOAD frontal cortices inversely correlated with age at death; suggesting a possible influence on survival rate. 29503034 2018
Entrez Id: 1524
Gene Symbol: CX3CR1
CX3CR1
0.010 GeneticVariation disease BEFREE We analyzed the association of the two CX3CR1 functional variants (rs3732379" genes_norm="1524">V249I, rs3732379; and rs3732378" genes_norm="1524">T280M, rs3732378) with neurofibrillary pathology progression rate according to Braak's staging system, age at onset (AAO), survival time, and risk of suffering LOAD. 28343297 2018