Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Among patients with non-MSI-high cancer, BRAF mutation status emerged as a distinct marker with higher connectivity in the network of proximal colon cancer, but not in distal colorectal cancer. 28623901 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE The mutational status of KRAS and BRAF(V600E) oncogenes combined with analysis of the DNA mismatch repair system with/without the CpG island methylator phenotype (CIMP) has been shown to identify colon cancer subtypes with distinct clinical features and prognoses. 26872400 2016
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 GeneticVariation disease BEFREE High lutein intake [odds ratio (OR), 0.63; 95% confidence interval (95% CI), 0.44-0.89], low refined grain intake (OR, 0.70; 95% CI, 0.53-0.94), or a high prudent diet score (OR, 0.66; 95% CI, 0.49-0.89) and PA/AA PPARgamma genotype were associated with reduced colon cancer risk. 15894676 2005
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE The aim of this study was to investigate the influence of BRAF and KRAS mutation status on the association between aspirin use and overall survival after colon cancer diagnosis. 28125730 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE A novel case of rhabdoid colon carcinoma associated with a positive CpG island methylator phenotype and BRAF mutation. 21315413 2011
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE We have tested a battery of melanoma and colon carcinoma cell lines that carry mutations in BRAF, NRAS and KRAS genes and have observed that those with NRAS and KRAS mutations are more sensitive to killing by IPA3. 22869096 2012
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE To date, identification of HER2 expression in gastric adenocarcinoma and KRAS, NRAS and BRAF mutations in colon cancer have proved essential for treatment decisions. 28067073 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer. 25884297 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE A set of 668 stage II and III CC samples from the PETACC-3 (Pan-European Trails in Alimentary Tract Cancers) clinical trial were used to assess differential gene expression between c.1799T>A (p.V600E) BRAF mutant and non-BRAF, non-KRAS mutant cancers (double wild type) and to construct a gene expression-based classifier for detecting BRAF mutant samples with high sensitivity. 22393095 2012
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF mutations in colon cancer are not likely attributable to defective DNA mismatch repair. 14500346 2003
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Serine/threonine kinase B-Raf proto-oncogene (BRAF) mutant colon cancer has a poor prognosis and there is an absence of targeted treatments for this subtype. 30396937 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Patient and tumor characteristics and BRAF and KRAS mutations in colon cancer, NCCTG/Alliance N0147. 24925349 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE These data suggest that the BRAF V600E mutation is not the target gene for abnormal MMR in carcinogenesis in patients with sporadic endometrial cancer, unlike in colon cancer. 19424571 2009
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF (V600E) and KRAS mutations were analyzed in node-positive colon cancer patients (n = 3305) treated with FOLFOX-based chemotherapy in an adjuvant trial (Alliance N0147). 26160882 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE CRC primaries had a lower incidence of PIK3CA and BRAF mutations in rectal cancer versus colon cancer (10% and 3.3%, respectively). 26553611 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF mutations were less frequent in colon cancer patients below 50 years relative to patients above 50 years (p-value: 0.044). 20444249 2010
Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
0.400 GeneticVariation disease BEFREE The ORs for the MUTYH Gln324His and the APEX1 Asp148Glu were statistically significant for colon cancer (adjusted OR 3.95, 95%CI 1.28-12.20, p = 0.017 for MUTYH Gln324His ; adjusted OR 3.04, 95%CI 1.38-6.71, p = 0.006 for APEX1 Asp148Glu). 18823566 2008
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Sorafenib and cetuximab therapy led to a mixed radiographic response with some areas showing dramatic improvement and other areas showing stable disease over a 7-month period which is a notably long period of progression-free survival for V600E BRAF mutated colon cancer. 23792568 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Recently, an oncogenic V600E hotspot mutation within BRAF, a kinase encoding gene from the RAS/RAF/MAPK pathway, has been found to be associated with sporadic MSI-H colon cancer, but its association with HNPCC remains to be further clarified. 15342696 2004
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE We investigated the role of BRAF activating mutation (BRAF-V600E) in colorectal tumourigenesis by studying the effects of forced expression of BRAF-V600E in the 'normal' colon epithelial NCM460 cell line and by targeting endogenous BRAF-V600E in MSI-High (MSI-H) colon cancer cell lines. 17427169 2007
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.400 GeneticVariation disease BEFREE Stratified meta-analysis indicated that PPAR-gamma 34 C>G was associated with colon cancer (OR = 0.8, 95% CI: 0.65-0.99, P = 0.04) in random-effect model, and the G allele decreased colon cancer risk. 20440859 2010
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE This study shows that BRAF mutations profiled from stage II and III colon cancer tumors were associated with poor SAR and validates and explains, at least in part, previous observations associating it with poor OS. 23045248 2012
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Fisher's exact test showed that only two detected mutations at BRAF (V600E) and PIK3CA (E542K) were significantly positively correlated with right-sided colon cancer. 29556349 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Female patients and older group harbored a higher KRAS mutation (P = 0.018 and P = 0.031, respectively); BRAF (V600E) mutation showed a higher frequency in colon cancer and poor differentiation tumors (P = 0.020 and P = 0.030, respectively); proximal tumors appeared a higher PIK3CA mutation (P<0.001) and distant metastatic tumors shared a higher NRAS mutation (P = 0.010). 24339949 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Activating BRAF mutations promote constitutive activation of the mitogen-activated protein kinase (MAPK) signaling pathway and are common in a variety of human malignancies, including melanoma and colon cancer. 27321184 2017