Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 947
Gene Symbol: CD34
CD34
0.010 Biomarker disease BEFREE Characteristic microscopic findings most notably include infiltrative growth, the invariable presence of oligodendroglioma-like cellular components, and intense immunolabeling for cluster of differentiation 34 (CD34). 27812792 2017
Entrez Id: 93100
Gene Symbol: NAPRT
NAPRT
0.010 Biomarker disease BEFREE In a series of primary tumor samples from lung and brain cancer patients, we demonstrate that >70 % of human small cell lung carcinomas, glioblastomas and oligodendrogliomas lack NAPRT identifying them as potentially suitable indications for the NAMPT/niacin combination. 29100430 2017
Entrez Id: 5777
Gene Symbol: PTPN6
PTPN6
0.010 Biomarker disease BEFREE PTPN6 and CUL3 were the key hub genes identified in the astrocytoma relative to the oligodendroglioma. 28924174 2017
Entrez Id: 4594
Gene Symbol: MMUT
MMUT
0.010 GeneticVariation disease BEFREE Sixty-five patients with 2007 histological designations (astrocytomas and oligodendrogliomas), 1p/19q status (+ = intact/- = co-deleted), and IDH1 mutation status (MUT/WT) were included in this study. 28547590 2017
Entrez Id: 30833
Gene Symbol: NT5C
NT5C
0.010 Biomarker disease BEFREE Astrocytomas did not change diagnosis in 30 of 36 cases (83.3 %); four of 36 (11.1 %) cases were reclassified as oligodendroglioma, one (2.8 %) as DNT and the other (2.8 %) as reactive gliosis. 27796734 2017
Entrez Id: 100288687
Gene Symbol: DUX4
DUX4
0.010 GeneticVariation disease BEFREE Finally, the key role of C1 in DNA binding also explains the fact that this domain is a hotspot for inactivating mutations in oligodendroglioma and other tumors, while being preserved in oncogenic CIC-DUX4 fusion chimeras associated to Ewing-like sarcomas. 28278156 2017
Entrez Id: 219793
Gene Symbol: TBATA
TBATA
0.010 GeneticVariation disease BEFREE In summary, although oligodendroglioma displays marked mutational heterogeneity, histological malignant transformation accompanying events such as considerable increase in mutation number and epigenetic profile change were not observed at recurrence, indicating that noticeable temporal and spatial genetic heterogeneity in oligodendrogliomas does not result in rapid tumor progression. 28270234 2017
Entrez Id: 8452
Gene Symbol: CUL3
CUL3
0.010 Biomarker disease BEFREE PTPN6 and CUL3 were the key hub genes identified in the astrocytoma relative to the oligodendroglioma. 28924174 2017
Entrez Id: 5925
Gene Symbol: RB1
RB1
0.010 Biomarker disease BEFREE Tumor types were characterized by specific broad and focal chromosomal events including focal loss of the INK4A/B locus in glioblastoma and loss of the RB1 gene and amplification of the PDGFRA gene in oligodendrogliomas. 27251041 2016
Entrez Id: 2034
Gene Symbol: EPAS1
EPAS1
0.010 GeneticVariation disease BEFREE To investigate the relationship between 3 hypoxic markers, carbonic anhydrase-9 (CA-9), hypoxia-inducible factor (HIF)-1α, and HIF-2α and the traditional genetic markers, deletions of chromosomes 1p and 19q and Isocitrate dehydrogenase 1 (IDH1) R132H mutation in oligodendrogliomas. 26960282 2016
Entrez Id: 23236
Gene Symbol: PLCB1
PLCB1
0.010 AlteredExpression disease BEFREE In GDS1962, PLCβ1 expression is the highest in nontumor brain tissue (n = 23) and is significantly higher than its expression in grade II gliomas [astrocytomas (n = 7) and oligodendrogliomas (n = 37)]. 26614510 2016
Entrez Id: 6663
Gene Symbol: SOX10
SOX10
0.010 AlteredExpression disease BEFREE SOX10 is important in nonneoplastic oligodendroglial development, but mRNA transcripts and protein expression are identified in a wider variety of CNS glial neoplasms than oligodendrogliomas. 26945037 2016
Entrez Id: 1859
Gene Symbol: DYRK1A
DYRK1A
0.010 Biomarker disease BEFREE Finally, because DYRK1A and CIC exhibit, respectively, prooncogenic vs. tumor suppressor activities in human oligodendroglioma, our results raise the possibility that DYRK1A may also down-regulate CIC in human cells. 27601662 2016
Entrez Id: 7297
Gene Symbol: TYK2
TYK2
0.010 Biomarker disease BEFREE Our data reveal that the methylation profiles in 23 of the 25 GC tumors corresponded to either IDH mutant astrocytoma (n = 6), IDH mutant and 1p/19q codeleted oligodendroglioma (n = 5), or IDH wild-type glioblastoma including various molecular subgroups, i.e., H3F3A-G34 mutant (n = 1), receptor tyrosine kinase 1 (RTK1, n = 4), receptor tyrosine kinase 2 (classic) (RTK2, n = 2) or mesenchymal (n = 5) glioblastoma groups. 26493382 2016
Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
0.010 GeneticVariation disease BEFREE Our data reveal that the methylation profiles in 23 of the 25 GC tumors corresponded to either IDH mutant astrocytoma (n = 6), IDH mutant and 1p/19q codeleted oligodendroglioma (n = 5), or IDH wild-type glioblastoma including various molecular subgroups, i.e., H3F3A-G34 mutant (n = 1), receptor tyrosine kinase 1 (RTK1, n = 4), receptor tyrosine kinase 2 (classic) (RTK2, n = 2) or mesenchymal (n = 5) glioblastoma groups. 26493382 2016
Entrez Id: 768
Gene Symbol: CA9
CA9
0.010 AlteredExpression disease BEFREE High expression of CA-9, a marker for hypoxia and acidosis, is associated with favorable prognosis in oligodendroglioma. 26960282 2016
Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
0.010 GeneticVariation disease BEFREE Our data reveal that the methylation profiles in 23 of the 25 GC tumors corresponded to either IDH mutant astrocytoma (n = 6), IDH mutant and 1p/19q codeleted oligodendroglioma (n = 5), or IDH wild-type glioblastoma including various molecular subgroups, i.e., H3F3A-G34 mutant (n = 1), receptor tyrosine kinase 1 (RTK1, n = 4), receptor tyrosine kinase 2 (classic) (RTK2, n = 2) or mesenchymal (n = 5) glioblastoma groups. 26493382 2016
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.010 GeneticVariation disease BEFREE Causal genetic changes in oligodendrogliomas (OD) with 1p/19q co-deletion include mutations in IDH1, IDH2, CIC, FUBP1, TERT promoter and NOTCH1. 25694352 2015
Entrez Id: 8350
Gene Symbol: H3C1
H3C1
0.010 Biomarker disease BEFREE The TP53 and HIST1H3A genes were the hub nodes in the PPI network of DEGs from GBM, while CNTN2 was linked to the highest degree in the OD PPI network. 25351872 2015
Entrez Id: 203074
Gene Symbol: PRSS55
PRSS55
0.010 Biomarker disease BEFREE This observation was confirmed after adjusting the results for age and tumor grade, the role of TSP-1 being most pronounced in oligodendrogliomas (p = 0.001). 25621889 2015
Entrez Id: 1385
Gene Symbol: CREB1
CREB1
0.010 AlteredExpression disease BEFREE Our findings demonstrate that astrocytomas and oligodendrogliomas are characterized by distinctive patterns of p-CREB expression. 25476123 2015
Entrez Id: 5594
Gene Symbol: MAPK1
MAPK1
0.010 AlteredExpression disease BEFREE Oncogenic KIAA1549-BRAF fusion with activation of the MAPK/ERK pathway in pediatric oligodendrogliomas. 25794445 2015
Entrez Id: 10777
Gene Symbol: ARPP21
ARPP21
0.010 AlteredExpression disease BEFREE Furthermore, screening with a defined threshold identified 6 genes that were highly expressed in GBM, including AFF2, CACNA2D3 and ARPP21, while the 6 highly expressed genes in OD notably included CNTN2. 25351872 2015
Entrez Id: 2048
Gene Symbol: EPHB2
EPHB2
0.010 AlteredExpression disease BEFREE Oncogenic KIAA1549-BRAF fusion with activation of the MAPK/ERK pathway in pediatric oligodendrogliomas. 25794445 2015
Entrez Id: 8357
Gene Symbol: H3C10
H3C10
0.010 Biomarker disease BEFREE The TP53 and HIST1H3A genes were the hub nodes in the PPI network of DEGs from GBM, while CNTN2 was linked to the highest degree in the OD PPI network. 25351872 2015