Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.010 Biomarker disease BEFREE Recent study demonstrates that CD147 could form a complex with ABCG2 on the cell membrane in primary effusion lymphoma. 23623923 2013
Entrez Id: 57007
Gene Symbol: ACKR3
ACKR3
0.020 AlteredExpression disease BEFREE KSHV G protein-coupled receptor inhibits lytic gene transcription in primary-effusion lymphoma cells via p21-mediated inhibition of Cdk2. 16150942 2006
Entrez Id: 57007
Gene Symbol: ACKR3
ACKR3
0.020 AlteredExpression disease BEFREE Expression of Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor monocistronic and bicistronic transcripts in primary effusion lymphomas. 11504542 2001
Entrez Id: 148
Gene Symbol: ADRA1A
ADRA1A
0.020 AlteredExpression disease BEFREE KSHV G protein-coupled receptor inhibits lytic gene transcription in primary-effusion lymphoma cells via p21-mediated inhibition of Cdk2. 16150942 2006
Entrez Id: 148
Gene Symbol: ADRA1A
ADRA1A
0.020 AlteredExpression disease BEFREE Expression of Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor monocistronic and bicistronic transcripts in primary effusion lymphomas. 11504542 2001
Entrez Id: 151
Gene Symbol: ADRA2B
ADRA2B
0.020 AlteredExpression disease BEFREE Expression of Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor monocistronic and bicistronic transcripts in primary effusion lymphomas. 11504542 2001
Entrez Id: 151
Gene Symbol: ADRA2B
ADRA2B
0.020 AlteredExpression disease BEFREE KSHV G protein-coupled receptor inhibits lytic gene transcription in primary-effusion lymphoma cells via p21-mediated inhibition of Cdk2. 16150942 2006
Entrez Id: 10598
Gene Symbol: AHSA1
AHSA1
0.010 AlteredExpression disease BEFREE Here, we demonstrate that capsaicin markedly inhibited the growth of KSHV latently infected PEL cells by inhibiting ERK, p38 MAPK and expression hIL-6, which are known to contribute to PEL growth and survival. 30838176 2019
Entrez Id: 7965
Gene Symbol: AIMP2
AIMP2
0.010 AlteredExpression disease BEFREE Here, we demonstrate that capsaicin markedly inhibited the growth of KSHV latently infected PEL cells by inhibiting ERK, p38 MAPK and expression hIL-6, which are known to contribute to PEL growth and survival. 30838176 2019
Entrez Id: 100271873
Gene Symbol: AIRN
AIRN
0.010 Biomarker disease BEFREE Our findings identify ER-transiting nascent IGF2R as an interaction partner of VKORC1v2 and target of vIL-6 regulation and IGF2R as a positive contributor to HHV-8 biology, thereby extending understanding of the mechanisms of VKORC1v2-associated vIL-6 function.<b>IMPORTANCE</b> HHV-8 vIL-6 promotes productive replication in the context of reactivated lytic replication in primary effusion lymphoma (PEL) and endothelial cells and sustains latently infected PEL cell viability. 30541844 2019
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 Biomarker disease BEFREE We also showed that p38MAPK and AKT inhibitors reduced PEL cell growth. 31787726 2019
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.020 Biomarker disease BEFREE Therefore, we used a KSHV(+) PEL/BCBL-1 xenograft model involving non-obese diabetic/severe-combined immunodeficient (NOD/SCID) mice, and compared characteristics of effusion and solid tumors with their parent cell culture-derived counterparts. 24587336 2014
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.020 Biomarker disease BEFREE Furthermore, combined administration of lenalidomide and BRD4 inhibitor JQ-1 significantly increased the survival of PEL bearing NOD-SCID mice in an orthotopic xenograft model as compared with either agent alone. 26119939 2016
Entrez Id: 27113
Gene Symbol: BBC3
BBC3
0.010 AlteredExpression disease BEFREE Capsaicin promoted transcriptional activation of CHOP, which increased mRNA expression of GADD34 and PUMA, resulting in PEL apoptosis. 31366879 2019
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.020 GeneticVariation disease BEFREE STR-428 represents a unique, B-cell lymphoma cell line carrying concurrent rearrangement of BCL2 and c-MYC genes with features distinct from those of HHV-8-related primary effusion lymphoma. 17368758 2007
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.020 Biomarker disease BEFREE To investigate whether HHV-8 may contribute to PEL development in the absence of EBV, the expression of seven potentially oncogenic HHV-8 open reading frames (ORFs) (ORF72/viral cyclin D, ORF16/viral bcl-2, ORF74/viral G-protein coupled receptor, ORFK2/viral IL-6, ORFK13/viral FLICE inhibitory protein, ORFK9/viral interferon regulatory factor, and ORFK1, equivalent to the gene encoding herpesvirus saimiri transforming protein) was assessed by reverse transcriptase-polymerase chain reaction (RT-PCR) in an EBV-negative PEL presenting in an HIV-negative patient. 10547588 1999
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.030 GeneticVariation disease BEFREE Human herpes virus 8-negative primary effusion lymphoma with BCL6 rearrangement in a patient with idiopathic CD4 positive T-lymphocytopenia. 18166773 2008
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.030 AlteredExpression disease BEFREE Primary effusion lymphoma (PEL), strongly linked with latent infection of Kaposi's sarcoma-associated herpesvirus (KSHV), constitutively expresses cellular interferon regulatory factor 4 (IRF4) while suppressing the expression of B cell lymphoma 6 (BCL6). 29397940 2018
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.030 GeneticVariation disease BEFREE Since BCL6 mutations are regarded as a genetic marker of B-cell transition through the germinal center (GC), these data are consistent with histogenetic derivation of PEL from GC or post-GC B-cells. 9892104 1999
Entrez Id: 332
Gene Symbol: BIRC5
BIRC5
0.010 AlteredExpression disease LHGDN Inhibition of STAT3 signaling induces apoptosis and decreases survivin expression in primary effusion lymphoma. 12393476 2003
Entrez Id: 96610
Gene Symbol: BMS1P20
BMS1P20
0.010 Biomarker disease BEFREE Immunoglobulin V region gene use and structure suggest antigen selection in AIDS-related primary effusion lymphomas. 10400426 1999
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation disease BEFREE Interestingly, we did not observe mutation in the B-Raf gene of the KSHV-infected PEL cell lines. 15705790 2005
Entrez Id: 23476
Gene Symbol: BRD4
BRD4
0.010 Biomarker disease BEFREE These results provide compelling evidence for clinical testing of IMiDs alone and in combination with BRD4 inhibitors for PEL. 26119939 2016
Entrez Id: 680
Gene Symbol: BRS3
BRS3
0.020 AlteredExpression disease BEFREE KSHV G protein-coupled receptor inhibits lytic gene transcription in primary-effusion lymphoma cells via p21-mediated inhibition of Cdk2. 16150942 2006
Entrez Id: 680
Gene Symbol: BRS3
BRS3
0.020 AlteredExpression disease BEFREE Expression of Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor monocistronic and bicistronic transcripts in primary effusion lymphomas. 11504542 2001